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ASM148541v1

Organism name:
Myroides odoratimimus (CFB group bacteria)
Taxonomy check:
OK
Infraspecific name:
Strain: CCUG 39352
BioSample:
SAMD00042711
BioProject:
PRJDB4325
Submitter:
Shandong University
Date:
2015/12/08
Assembly type:
na
Assembly level:
Contig
Genome representation:
full
Relation to type material:
assembly from type material
GenBank assembly accession:
GCA_001485415.1 (latest)
RefSeq assembly accession:
GCF_001485415.1 (latest)
RefSeq assembly and GenBank assembly identical:
yes
WGS Project:
BCMQ01
Assembly method:
SOAPdenovo v. 1.05
Genome coverage:
196x
Sequencing technology:
Illumina Solexa

IDs: 604181 [UID] 2755078 [GenBank] 2777948 [RefSeq]

See Genome Information for Myroides odoratimimus

There are 72 assemblies for this organism

See more

History (Show revision history)

Comment

Global statistics

Total sequence length4,240,762
Total ungapped length4,240,762
Number of contigs65
Contig N50155,249
Contig L508
Total number of chromosomes and plasmids0
Number of component sequences (WGS or clone)65

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Global assembly definition

Download the full sequence report
Click on the table row to see sequence details in the table to the right
Assembly Unit Name
Primary Assembly
The primary assembly unit does not have any assembled chromosomes or linkage groups.
Please download the full sequence report for information on the scaffolds.

Assembly statistics

MoleculeTotal
Length
Contig
Count
Ungapped
Length
Contig
N50
Spanned
Gaps
Unspanned
Gaps
unplaced4,240,762654,240,762155,24900

Assembly QA

Taxonomy Check Data

Declared organism

Organism nameSpecies name
Myroides odoratimimusMyroides odoratimimus

Best-matching type-strain assembly for declared species

AssemblyOrganism nameType category
GCA_900453765.1Myroides odoratimimustype

Best-matching type-strain assembly

AssemblySpecies nameType category
GCA_900453765.1Myroides odoratimimustype

Average Nucleotide Identity (ANI) data

ANIQuery coverageSubject coverage
Declared type99.9798.2297.44
Best-match type99.9798.2297.44

ANI result

Taxonomy check statusBest match statusComment
OKspecies-matchna