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6755_6#9

Organism name:
Bacillus subtilis (firmicutes)
Taxonomy check:
OK
Infraspecific name:
Strain: type strain: N
BioSample:
SAMEA1025530
BioProject:
PRJEB2395
Submitter:
SC
Date:
2015/04/22
Assembly type:
na
Assembly level:
Contig
Genome representation:
full
GenBank assembly accession:
GCA_001342275.1 (latest)
RefSeq assembly accession:
GCF_001342275.1 (latest)
RefSeq assembly and GenBank assembly identical:
yes
WGS Project:
CHTU01
Genome coverage:
100x

IDs: 516561 [UID] 2423388 [GenBank] 28182608 [RefSeq]

See Genome Information for Bacillus subtilis

There are 1054 assemblies for this organism

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History (Show revision history)

Comment

The organism was changed from 'Streptococcus pneumoniae' to 'Bacillus subtilis' in July 2020.

Taxonomic-Update-Statistics

##Taxonomic-Update-Statistics-START##
This Genome (query)::GCA_001342275.1
Current Name::Bacillus subtilis
Previous Name::Streptococcus pneumoniae
Date Updated::2020-07-30
Analysis Type::Average Nucleotide Identity (ANI)
Analysis 1 (A1)::Query vs. TYPE genome for current name
A1 Genome (subject)::GCA_012931705.1
A1 Name::Bacillus subtilis
A1 ANI::98.76%
A1 Query Coverage::93.81%
A1 Subject Coverage::89.46%
Analysis 2 (A2)::Query vs. TYPE genome for previous name
A2 Genome (subject)::GCA_001457635.1
A2 Name::Streptococcus pneumoniae
A2 ANI::84.32%
A2 Query Coverage::0.14%
A2 Subject Coverage::0.27%
##Taxonomic-Update-Statistics-END##

Global statistics

Total sequence length4,030,932
Total ungapped length4,030,932
Number of contigs13
Contig N501,012,577
Contig L502
Total number of chromosomes and plasmids0
Number of component sequences (WGS or clone)13

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Global assembly definition

Download the full sequence report
Click on the table row to see sequence details in the table to the right
Assembly Unit Name
Primary Assembly
The primary assembly unit does not have any assembled chromosomes or linkage groups.
Please download the full sequence report for information on the scaffolds.

Assembly statistics

MoleculeTotal
Length
Contig
Count
Ungapped
Length
Contig
N50
Spanned
Gaps
Unspanned
Gaps
unplaced4,030,932134,030,9321,012,57700

Assembly QA

Taxonomy Check Data

Declared organism

Organism nameSpecies name
Bacillus subtilisBacillus subtilis

Best-matching type-strain assembly for declared species

AssemblyOrganism nameType category
GCA_000009045.1Bacillus subtilis subsp. subtilis str. 168type

Best-matching type-strain assembly

AssemblySpecies nameType category
GCA_000009045.1Bacillus subtilistype

Average Nucleotide Identity (ANI) data

ANIQuery coverageSubject coverage
Declared type98.7494.5790.43
Best-match type98.7494.5790.43

ANI result

Taxonomy check statusBest match statusComment
OKderived-species-matchna