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PRJEB5505_assembly_1

Organism name:
Jeotgalicoccus saudimassiliensis (firmicutes)
Taxonomy check:
OK
Infraspecific name:
Strain: 13MG44_air
BioSample:
SAMEA2659318
BioProject:
PRJEB5506
Submitter:
URMITE
Date:
2014/09/15
Assembly type:
na
Assembly level:
Complete Genome
Genome representation:
full
RefSeq category:
representative genome
Relation to type material:
assembly from type material
GenBank assembly accession:
GCA_000756715.2 (latest)
RefSeq assembly accession:
GCF_000756715.1 (latest)
RefSeq assembly and GenBank assembly identical:
yes
WGS Project:
CCSE01
Genome coverage:
31x

IDs: 219011 [UID] 1367178 [GenBank] 1502738 [RefSeq]

See Genome Information for Jeotgalicoccus saudimassiliensis

Pathogen Detection Resources

History (Show revision history)

Comment

Global statistics

Total sequence length2,191,063
Total ungapped length2,191,063
Total number of chromosomes and plasmids1

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Assembly Information

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Global assembly definition

Download the full sequence report
Click on the table row to see sequence details in the table to the right
Assembly Unit Name
Primary Assembly
Assembly Unit: Primary Assembly (GCF_000756725.1)
Molecule nameGenBank sequenceRefSeq sequence
Chromosome CCSE01000001.1=NZ_CCSE01000001.1

Assembly statistics

MoleculeTotal
Length
Chromosome 2,191,063

Assembly QA

Taxonomy Check Data

Declared organism

Organism nameSpecies name
Jeotgalicoccus saudimassiliensisJeotgalicoccus saudimassiliensis

Best-matching type-strain assembly for declared species

AssemblyOrganism nameType category
samena

Best-matching type-strain assembly

AssemblySpecies nameType category
GCA_014207425.1Jeotgalicoccus coquinaetype

Average Nucleotide Identity (ANI) data

ANIQuery coverageSubject coverage
Declared typenanana
Best-match type87.5282.9082.18

ANI result

Taxonomy check statusBest match statusComment
OKbelow-threshold-mismatchAssembly is the type-strain, mismatch is within genus and expected