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Source database (GenBank or RefSeq) File type

ASM61414v1

Organism name:: Bacteroides faecichinchillae JCM 17102 (CFB group bacteria)
Taxonomy check:: OK
Infraspecific name:: Strain: JCM 17102
BioSample:: SAMD00004031
BioProject:: PRJDB601
Submitter:: The University of Tokyo
Date:: 2014/03/31
Assembly type:: na
Assembly level:: Contig
Genome representation:: full
Relation to type material:: assembly from type material
GenBank assembly accession:: GCA_000614145.1 (latest)
RefSeq assembly accession:: GCF_000614145.1 (latest)
RefSeq assembly and GenBank assembly identical:: yes
WGS Project:: BAKK01
Assembly method:: Newbler v. 2.8
Genome coverage:: 26x
Sequencing technology:: Ion PGM

IDs: 142771 [UID] 995838 [GenBank] 1084288 [RefSeq]

See Genome Information for Bacteroides faecichinchillae

Pathogen Detection Resources

There are 4 assemblies for this organism

History (Show revision history)

GenBank Assembly Accession		RefSeq Assembly Accession	Assembly Name	Assembly Level	Status
GCA_000614145.1	=	GCF_000614145.1	ASM61414v1	Contig	Latest GenBank, Latest RefSeq

Comment

This work had been advanced in the National BioResource Project(NBRP) supported by the Ministry of Education, Culture, Sports, Science and Technology of Japan(MEXT) as NBRP Genome Information Upgrading Program.
Source DNA and bacteria available from Microbe Division/JCM, RIKEN BioResource Center.
http://www.jcm.riken.go.jp/
Genome ... sequencing done by Center for Omics and Bioinformatics, Graduate School of Frontier Sciences, University of Tokyo. http://www.cb.k.u-tokyo.ac.jp/hattorilab/

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Global statistics

Total sequence length	4,782,583
Total ungapped length	4,782,583
Number of contigs	144
Contig N50	79,402
Contig L50	16
Total number of chromosomes and plasmids	0
Number of component sequences (WGS or clone)	144

	ANI	Query coverage	Subject coverage
Declared type	99.97	99.76	99.27
Best-match type	99.97	99.76	99.27

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ASM61414v1

See Genome Information for Bacteroides faecichinchillae

Pathogen Detection Resources

There are 4 assemblies for this organism

History (Show revision history)

Comment

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Average Nucleotide Identity (ANI) data

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