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BNeo1

Organism name:
Bacteroides neonati (CFB group bacteria)
Taxonomy check:
OK
Infraspecific name:
Strain: MS4
BioSample:
SAMEA3138831
BioProject:
PRJEB4701
Submitter:
URMITE
Date:
2013/11/07
Assembly type:
na
Assembly level:
Scaffold
Genome representation:
full
Relation to type material:
assembly from type material
GenBank assembly accession:
GCA_000499785.1 (latest)
RefSeq assembly accession:
GCF_000499785.1 (latest)
RefSeq assembly and GenBank assembly identical:
yes
WGS Project:
CBVB01
Genome coverage:
27x

IDs: 81931 [UID] 862398 [GenBank] 1524188 [RefSeq]

See Genome Information for Bacteroides neonati

Pathogen Detection Resources

There are 2 assemblies for this organism

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History (Show revision history)

Comment

Global statistics

Total sequence length5,025,334
Total ungapped length5,024,689
Gaps between scaffolds0
Number of scaffolds18
Scaffold N50595,790
Scaffold L503
Number of contigs35
Contig N50271,585
Contig L507
Total number of chromosomes and plasmids0
Number of component sequences (WGS or clone)35

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Global assembly definition

Download the full sequence report
Click on the table row to see sequence details in the table to the right
Assembly Unit Name
Primary Assembly
The primary assembly unit does not have any assembled chromosomes or linkage groups.
Please download the full sequence report for information on the scaffolds.

Assembly statistics

MoleculeTotal
Length		Scaffold
Count		Ungapped
Length		Scaffold
N50		Spanned
Gaps		Unspanned
Gaps
unplaced5,025,334185,024,689595,790170

Assembly QA

Taxonomy Check Data

Declared organism

Organism nameSpecies name
Bacteroides neonatiBacteroides neonati

Best-matching type-strain assembly for declared species

AssemblyOrganism nameType category
samena

Best-matching type-strain assembly

AssemblySpecies nameType category
GCA_000372405.1Porphyromonas someraesuspected-type

Average Nucleotide Identity (ANI) data

ANIQuery coverageSubject coverage
Declared typenanana
Best-match type99.531.012.16

ANI result

Taxonomy check statusBest match statusComment
OKlow-coverageAssembly is the type-strain, no match is expected