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Source database (GenBank or RefSeq) File type

Ente_flav_ATCC49996_V1

Organism name:: Enterococcus casseliflavus ATCC 49996 (firmicutes)
Taxonomy check:: OK
Infraspecific name:: Culture-collection: ATCC:49996
Infraspecific name:: Strain: ATCC 49996
BioSample:: SAMN00809112
BioProject:: PRJNA88843
Submitter:: Broad Institute
Date:: 2013/05/15
Assembly type:: na
Assembly level:: Scaffold
Genome representation:: full
Relation to type material:: assembly from synonym type material
GenBank assembly accession:: GCA_000393915.1 (latest)
RefSeq assembly accession:: GCF_000393915.1 (latest)
RefSeq assembly and GenBank assembly identical:: yes
WGS Project:: AJAM01
Assembly method:: allpaths v. R41985
Genome coverage:: 279.0x
Sequencing technology:: Illumina

IDs: 681658 [UID] 681658 [GenBank] 1432278 [RefSeq]

See Genome Information for Enterococcus casseliflavus

Pathogen Detection Resources

There are 214 assemblies for this organism

History (Show revision history)

GenBank Assembly Accession		RefSeq Assembly Accession	Assembly Name	Assembly Level	Status
GCA_000393915.1	=	GCF_000393915.1	Ente_flav_ATCC49996_V1	Scaffold	Latest GenBank, Latest RefSeq

Comment

Please be aware that the annotation is done automatically with little or no manual curation.

Global statistics

Total sequence length	3,590,162
Total ungapped length	3,573,970
Gaps between scaffolds	0
Number of scaffolds	10
Scaffold N50	2,159,572
Scaffold L50	1
Number of contigs	33
Contig N50	381,714
Contig L50	3
Total number of chromosomes and plasmids	0
Number of component sequences (WGS or clone)	33

	ANI	Query coverage	Subject coverage
Declared type	98.33	82.61	84.41
Best-match type	98.33	82.61	84.41

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Ente_flav_ATCC49996_V1

See Genome Information for Enterococcus casseliflavus

Pathogen Detection Resources

There are 214 assemblies for this organism

History (Show revision history)

Comment

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Average Nucleotide Identity (ANI) data

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