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CloSac1.0

Organism name:
Clostridium saccharoperbutylacetonicum N1-4(HMT) (firmicutes)
Taxonomy check:
OK
Infraspecific name:
Culture-collection: ATCC:27021
Infraspecific name:
Strain: ATCC 27021
BioSample:
SAMN02469458
BioProject:
PRJNA186901
Submitter:
CIB-CSIC
Date:
2013/01/30
Assembly type:
na
Assembly level:
Contig
Genome representation:
full
Relation to type material:
assembly from type material
GenBank assembly accession:
GCA_000334435.1 (latest)
RefSeq assembly accession:
GCF_000334435.1 (latest)
RefSeq assembly and GenBank assembly identical:
yes
WGS Project:
AOIF01
Assembly method:
Newbler v. 2.6
Genome coverage:
20.6x
Sequencing technology:
454

IDs: 628818 [UID] 529918 [GenBank] 628818 [RefSeq]

See Genome Information for Clostridium saccharoperbutylacetonicum

There are 7 assemblies for this organism

See more

History (Show revision history)

Comment

Global statistics

Total sequence length6,569,628
Total ungapped length6,569,628
Number of contigs210
Contig N5078,354
Contig L5030
Total number of chromosomes and plasmids0
Number of component sequences (WGS or clone)210

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Global assembly definition

Download the full sequence report
Click on the table row to see sequence details in the table to the right
Assembly Unit Name
Primary Assembly
The primary assembly unit does not have any assembled chromosomes or linkage groups.
Please download the full sequence report for information on the scaffolds.

Assembly statistics

MoleculeTotal
Length
Contig
Count
Ungapped
Length
Contig
N50
Spanned
Gaps
Unspanned
Gaps
unplaced6,569,6282106,569,62878,35400

Assembly QA

Taxonomy Check Data

Declared organism

Organism nameSpecies name
Clostridium saccharoperbutylacetonicum N1-4(HMT)Clostridium saccharoperbutylacetonicum

Best-matching type-strain assembly for declared species

AssemblyOrganism nameType category
GCA_000340885.1Clostridium saccharoperbutylacetonicum N1-4(HMT)type

Best-matching type-strain assembly

AssemblySpecies nameType category
GCA_000340885.1Clostridium saccharoperbutylacetonicumtype

Average Nucleotide Identity (ANI) data

ANIQuery coverageSubject coverage
Declared type99.9899.9498.49
Best-match type99.9899.9498.49

ANI result

Taxonomy check statusBest match statusComment
OKspecies-matchna