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Source database (GenBank or RefSeq) File type

ASM27560v1

Organism name:: Pyrococcus furiosus COM1 (euryarchaeotes)
Taxonomy check:: OK
Infraspecific name:: Strain: COM1
BioSample:: SAMN02603219
BioProject:: PRJNA163827
Submitter:: ENIGMA- Ecosystems and Networks Integrated with Genes and Molecular Assemblies
Date:: 2012/06/29
Assembly type:: na
Assembly level:: Complete Genome
Genome representation:: full
GenBank assembly accession:: GCA_000275605.1 (latest)
RefSeq assembly accession:: GCF_000275605.1 (latest)
RefSeq assembly and GenBank assembly identical:: yes

IDs: 402658 [UID] 395078 [GenBank] 402658 [RefSeq]

See Genome Information for Pyrococcus furiosus

Pathogen Detection Resources

There are 3 assemblies for this organism

History (Show revision history)

GenBank Assembly Accession		RefSeq Assembly Accession	Assembly Name	Assembly Level	Status
GCA_000275605.1	=	GCF_000275605.1	ASM27560v1	Complete Genome	Latest GenBank, Latest RefSeq

Comment

The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/

Genome-Annotation-Data

##Genome-Annotation-Data-START##Annotation Provider::NCBI RefSeq
Annotation Name::GCF_000275605.1-RS_2024_03_20
Annotation Date::03/20/2024 01:35:33
Annotation Pipeline::NCBI Prokaryotic Genome Annotation Pipeline (PGAP)
Annotation Method::Best-placed reference protein set; GeneMarkS-2+
Annotation Software revision::6.7
Features Annotated::Gene; CDS; rRNA; tRNA; ncRNA
Genes (total)::2,155
CDSs (total)::2,088
Genes (coding)::2,033
CDSs (with protein)::2,033
Genes (RNA)::67
rRNAs::2, 1, 1 (5S, 16S, 23S)
complete rRNAs::2, 1, 1 (5S, 16S, 23S)
tRNAs::46
ncRNAs::17
Pseudo Genes (total)::55
CDSs (without protein)::55
Pseudo Genes (ambiguous residues)::0 of 55
Pseudo Genes (frameshifted)::32 of 55
Pseudo Genes (incomplete)::31 of 55
Pseudo Genes (internal stop)::11 of 55
Pseudo Genes (multiple problems)::15 of 55
CRISPR Arrays::7
##Genome-Annotation-Data-END##

Global statistics

Total sequence length	1,909,827
Total ungapped length	1,909,827
Total number of chromosomes and plasmids	1

	ANI	Query coverage	Subject coverage
Declared type	99.96	99.34	99.42
Best-match type	99.96	99.34	99.42

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ASM27560v1

See Genome Information for Pyrococcus furiosus

Pathogen Detection Resources

There are 3 assemblies for this organism

History (Show revision history)

Comment

Genome-Annotation-Data

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Average Nucleotide Identity (ANI) data

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