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ASM1878v1

Organism name:
Acholeplasma laidlawii PG-8A (mycoplasmas)
Taxonomy check:
OK
Infraspecific name:
Strain: PG-8A
BioSample:
SAMN02603756
BioProject:
PRJNA19259
Submitter:
Research Institute for Physico-Chemical Medicine
Date:
2007/12/07
Assembly type:
na
Assembly level:
Complete Genome
Genome representation:
full
Relation to type material:
assembly from type material
GenBank assembly accession:
GCA_000018785.1 (latest)
RefSeq assembly accession:
GCF_000018785.1 (latest)
RefSeq assembly and GenBank assembly identical:
yes

IDs: 39848 [UID] 19588 [GenBank] 39848 [RefSeq]

See Genome Information for Acholeplasma laidlawii

There are 18 assemblies for this organism

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History (Show revision history)

Comment

Bacteria available from Research Institute for Physico-Chemical Medicine, Federal Agency of Public Health and Social Development of the Russian Federation. Govorun V.M. E-mail: govorun@hotmail.ru
The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can ... be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/  more

Genome-Annotation-Data

##Genome-Annotation-Data-START##
Annotation Provider::NCBI RefSeq
Annotation Name::GCF_000018785.1-RS_2024_03_27
Annotation Date::03/27/2024 00:39:56
Annotation Pipeline::NCBI Prokaryotic Genome Annotation Pipeline (PGAP)
Annotation Method::Best-placed reference protein set; GeneMarkS-2+
Annotation Software revision::6.7
Features Annotated::Gene; CDS; rRNA; tRNA; ncRNA
Genes (total)::1,436
CDSs (total)::1,392
Genes (coding)::1,386
CDSs (with protein)::1,386
Genes (RNA)::44
rRNAs::2, 2, 2 (5S, 16S, 23S)
complete rRNAs::2, 2, 2 (5S, 16S, 23S)
tRNAs::35
ncRNAs::3
Pseudo Genes (total)::6
CDSs (without protein)::6
Pseudo Genes (ambiguous residues)::0 of 6
Pseudo Genes (frameshifted)::1 of 6
Pseudo Genes (incomplete)::5 of 6
Pseudo Genes (internal stop)::1 of 6
Pseudo Genes (multiple problems)::1 of 6
##Genome-Annotation-Data-END##

Global statistics

Total sequence length1,496,992
Total ungapped length1,496,992
Total number of chromosomes and plasmids1

Supplemental Content

PubMed articles for this assembly

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Global assembly definition

Download the full sequence report
Click on the table row to see sequence details in the table to the right
Assembly Unit Name
Primary Assembly
Assembly Unit: Primary Assembly (GCF_000018795.1)
Molecule nameGenBank sequenceRefSeq sequence
Chromosome CP000896.1=NC_010163.1

Assembly statistics

MoleculeTotal
Length
Chromosome 1,496,992

Assembly QA

Taxonomy Check Data

Declared organism

Organism nameSpecies name
Acholeplasma laidlawii PG-8AAcholeplasma laidlawii

Best-matching type-strain assembly for declared species

AssemblyOrganism nameType category
GCA_900476025.1Acholeplasma laidlawiitype

Best-matching type-strain assembly

AssemblySpecies nameType category
GCA_900476025.1Acholeplasma laidlawiitype

Average Nucleotide Identity (ANI) data

ANIQuery coverageSubject coverage
Declared type99.9899.9199.87
Best-match type99.9899.9199.87

ANI result

Taxonomy check statusBest match statusComment
OKspecies-matchna