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AVDCRST-MAG08

Organism name:
uncultured Acetobacteraceae bacterium (a-proteobacteria)
Taxonomy check:
Inconclusive
Isolate:
AVDCRST_MAG08
BioSample:
SAMEA6526590
BioProject:
PRJEB36534
Submitter:
UNIVERSITY OF VIENNA
Date:
2020/06/30
Assembly type:
na
Assembly level:
Scaffold
Genome representation:
full
Excluded from RefSeq:
  • derived from metagenome
  • genus undefined
GenBank assembly accession:
GCA_902805645.1 (latest)
RefSeq assembly accession:
n/a
RefSeq assembly and GenBank assembly identical:
n/a
WGS Project:
CADCTG01
Genome coverage:
89x

IDs: 7354461 [UID] 20350368 [GenBank]

See Genome Information for uncultured Acetobacteraceae bacterium

Pathogen Detection Resources

There are 79 assemblies for this organism

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History (Show revision history)

Comment

Global statistics

Total sequence length4,289,992
Total ungapped length4,289,467
Gaps between scaffolds0
Number of scaffolds377
Scaffold N5015,711
Scaffold L5079
Number of contigs403
Contig N5015,662
Contig L5080
Total number of chromosomes and plasmids0
Number of component sequences (WGS or clone)377

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Global assembly definition

Download the full sequence report
Click on the table row to see sequence details in the table to the right
Assembly Unit Name
Primary Assembly
The primary assembly unit does not have any assembled chromosomes or linkage groups.
Please download the full sequence report for information on the scaffolds.

Assembly statistics

MoleculeTotal
Length		Scaffold
Count		Ungapped
Length		Scaffold
N50		Spanned
Gaps		Unspanned
Gaps
unplaced4,289,9923774,289,46715,711260

Assembly QA

Taxonomy Check Data

Declared organism

Organism nameSpecies name
uncultured Acetobacteraceae bacteriumuncultured Acetobacteraceae bacterium

Best-matching type-strain assembly for declared species

AssemblyOrganism nameType category
no-typeno-type

Best-matching type-strain assembly

AssemblySpecies nameType category
GCA_039523795.1Craurococcus roseustype

Average Nucleotide Identity (ANI) data

ANIQuery coverageSubject coverage
Declared typenanana
Best-match type86.3959.6847.13

ANI result

Taxonomy check statusBest match statusComment
Inconclusivebelow-threshold-lineage-matchna