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AG-918-K05

Organism name:
uncultured SAR86 cluster bacterium (g-proteobacteria)
Taxonomy check:
Inconclusive
Isolate:
AG-918-K05
BioSample:
SAMEA6074615
BioProject:
PRJEB33281
Submitter:
WOODS HOLE OCEANOGRAPHIC INSTITUTION
Date:
2019/11/07
Assembly type:
na
Assembly level:
Contig
Genome representation:
full
Excluded from RefSeq:
  • derived from metagenome
  • genus undefined
GenBank assembly accession:
GCA_902612915.1 (latest)
RefSeq assembly accession:
n/a
RefSeq assembly and GenBank assembly identical:
n/a
WGS Project:
CACMFH01
Genome coverage:
935x

IDs: 5305381 [UID] 15361448 [GenBank]

See Genome Information for uncultured SAR86 cluster bacterium

Pathogen Detection Resources

There are 701 assemblies for this organism

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History (Show revision history)

Comment

Global statistics

Total sequence length1,069,136
Total ungapped length1,069,136
Number of contigs25
Contig N5084,577
Contig L505
Total number of chromosomes and plasmids0
Number of component sequences (WGS or clone)25

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Global assembly definition

Download the full sequence report
Click on the table row to see sequence details in the table to the right
Assembly Unit Name
Primary Assembly
The primary assembly unit does not have any assembled chromosomes or linkage groups.
Please download the full sequence report for information on the scaffolds.

Assembly statistics

MoleculeTotal
Length		Contig
Count		Ungapped
Length		Contig
N50		Spanned
Gaps		Unspanned
Gaps
unplaced1,069,136251,069,13684,57700

Assembly QA

Taxonomy Check Data

Declared organism

Organism nameSpecies name
uncultured SAR86 cluster bacteriumuncultured SAR86 cluster bacterium

Best-matching type-strain assembly for declared species

AssemblyOrganism nameType category
no-typeno-type

Best-matching type-strain assembly

AssemblySpecies nameType category
GCA_026089295.1Fusobacterium simiaetype

Average Nucleotide Identity (ANI) data

ANIQuery coverageSubject coverage
Declared typenanana
Best-match type81.440.080.03

ANI result

Taxonomy check statusBest match statusComment
Inconclusivelow-coveragena