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26045_1#279

Organism name:
Klebsiella pneumoniae (enterobacteria)
Taxonomy check:
OK
Infraspecific name:
Strain: 4928STDY7071100
BioSample:
SAMEA104567211
BioProject:
PRJEB22252
Submitter:
SC
Date:
2019/07/11
Assembly type:
na
Assembly level:
Scaffold
Genome representation:
full
GenBank assembly accession:
GCA_902166265.1 (latest)
RefSeq assembly accession:
GCF_902166265.1 (latest)
RefSeq assembly and GenBank assembly identical:
yes
WGS Project:
CABHJT01
Genome coverage:
96x

IDs: 3812541 [UID] 12056548 [GenBank] 12150298 [RefSeq]

See Genome Information for Klebsiella pneumoniae

Pathogen Detection Resources

There are 65433 assemblies for this organism

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History (Show revision history)

Comment

Global statistics

Total sequence length5,256,823
Total ungapped length5,254,453
Gaps between scaffolds0
Number of scaffolds30
Scaffold N50468,351
Scaffold L504
Number of contigs40
Contig N50356,575
Contig L505
Total number of chromosomes and plasmids0
Number of component sequences (WGS or clone)30

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Global assembly definition

Download the full sequence report
Click on the table row to see sequence details in the table to the right
Assembly Unit Name
Primary Assembly
The primary assembly unit does not have any assembled chromosomes or linkage groups.
Please download the full sequence report for information on the scaffolds.

Assembly statistics

MoleculeTotal
Length		Scaffold
Count		Ungapped
Length		Scaffold
N50		Spanned
Gaps		Unspanned
Gaps
unplaced5,256,823305,254,453468,351100

Assembly QA

Taxonomy Check Data

Declared organism

Organism nameSpecies name
Klebsiella pneumoniaeKlebsiella pneumoniae

Best-matching type-strain assembly for declared species

AssemblyOrganism nameType category
GCA_000742135.1Klebsiella pneumoniaetype

Best-matching type-strain assembly

AssemblySpecies nameType category
GCA_000742135.1Klebsiella pneumoniaetype

Average Nucleotide Identity (ANI) data

ANIQuery coverageSubject coverage
Declared type99.1389.6884.99
Best-match type99.1389.6884.99

ANI result

Taxonomy check statusBest match statusComment
OKspecies-matchna