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25964_2#237

Organism name:
Enterococcus casseliflavus (firmicutes)
Taxonomy check:
OK
Infraspecific name:
Strain: 4928STDY7387722
BioSample:
SAMEA104694359
BioProject:
PRJEB22252
Submitter:
SC
Date:
2019/07/11
Assembly type:
na
Assembly level:
Scaffold
Genome representation:
full
GenBank assembly accession:
GCA_902164465.1 (latest)
RefSeq assembly accession:
GCF_902164465.1 (latest)
RefSeq assembly and GenBank assembly identical:
yes
WGS Project:
CABHDD01
Genome coverage:
124x

IDs: 3810751 [UID] 12052988 [GenBank] 12303568 [RefSeq]

See Genome Information for Enterococcus casseliflavus

There are 207 assemblies for this organism

See more

History (Show revision history)

Comment

Global statistics

Total sequence length3,595,083
Total ungapped length3,594,458
Gaps between scaffolds0
Number of scaffolds27
Scaffold N50499,540
Scaffold L503
Number of contigs29
Contig N50499,540
Contig L503
Total number of chromosomes and plasmids0
Number of component sequences (WGS or clone)27

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Global assembly definition

Download the full sequence report
Click on the table row to see sequence details in the table to the right
Assembly Unit Name
Primary Assembly
The primary assembly unit does not have any assembled chromosomes or linkage groups.
Please download the full sequence report for information on the scaffolds.

Assembly statistics

MoleculeTotal
Length
Scaffold
Count
Ungapped
Length
Scaffold
N50
Spanned
Gaps
Unspanned
Gaps
unplaced3,595,083273,594,458499,54020

Assembly QA

Taxonomy Check Data

Declared organism

Organism nameSpecies name
Enterococcus casseliflavusEnterococcus casseliflavus

Best-matching type-strain assembly for declared species

AssemblyOrganism nameType category
GCA_016727345.1Enterococcus casseliflavustype

Best-matching type-strain assembly

AssemblySpecies nameType category
GCA_016727345.1Enterococcus casseliflavustype

Average Nucleotide Identity (ANI) data

ANIQuery coverageSubject coverage
Declared type98.2183.4484.52
Best-match type98.2183.4484.52

ANI result

Taxonomy check statusBest match statusComment
OKspecies-matchna