U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Download Assembly



25426_7#352

Organism name:
Enterococcus faecalis (firmicutes)
Taxonomy check:
OK
Infraspecific name:
Strain: 4928STDY7071635
BioSample:
SAMEA104567740
BioProject:
PRJEB22252
Submitter:
SC
Date:
2019/07/08
Assembly type:
na
Assembly level:
Scaffold
Genome representation:
full
Excluded from RefSeq:
  • from large multi-isolate project
GenBank assembly accession:
GCA_902162085.1 (latest)
RefSeq assembly accession:
n/a
RefSeq assembly and GenBank assembly identical:
n/a
WGS Project:
CABGUF01
Genome coverage:
84x

IDs: 8574811 [UID] 23261298 [GenBank]

See Genome Information for Enterococcus faecalis

Pathogen Detection Resources

There are 8874 assemblies for this organism

See more

History (Show revision history)

Comment

Global statistics

Total sequence length3,032,096
Total ungapped length3,031,915
Gaps between scaffolds0
Number of scaffolds59
Scaffold N50190,081
Scaffold L506
Number of contigs61
Contig N50190,081
Contig L506
Total number of chromosomes and plasmids0
Number of component sequences (WGS or clone)59

Supplemental Content

Access the data

Assembly Information

Related Information

Recent activity

Clear Turn Off Turn On

Your browsing activity is empty.

Activity recording is turned off.

Turn recording back on

See more...

Global assembly definition

Download the full sequence report
Click on the table row to see sequence details in the table to the right
Assembly Unit Name
Primary Assembly
The primary assembly unit does not have any assembled chromosomes or linkage groups.
Please download the full sequence report for information on the scaffolds.

Assembly statistics

MoleculeTotal
Length		Scaffold
Count		Ungapped
Length		Scaffold
N50		Spanned
Gaps		Unspanned
Gaps
unplaced3,032,096593,031,915190,08120

Assembly QA

Taxonomy Check Data

Declared organism

Organism nameSpecies name
Enterococcus faecalisEnterococcus faecalis

Best-matching type-strain assembly for declared species

AssemblyOrganism nameType category
GCA_000392875.1Enterococcus faecalis ATCC 19433 = NBRC 100480type

Best-matching type-strain assembly

AssemblySpecies nameType category
GCA_000392875.1Enterococcus faecalistype

Average Nucleotide Identity (ANI) data

ANIQuery coverageSubject coverage
Declared type99.6388.6293.41
Best-match type99.6388.6293.41

ANI result

Taxonomy check statusBest match statusComment
OKspecies-matchna