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25426_7#337

Organism name:
Enterococcus faecalis (firmicutes)
Taxonomy check:
OK
Infraspecific name:
Strain: 4928STDY7071619
BioSample:
SAMEA104567724
BioProject:
PRJEB22252
Submitter:
SC
Date:
2019/07/08
Assembly type:
na
Assembly level:
Scaffold
Genome representation:
full
GenBank assembly accession:
GCA_902162035.1 (latest)
RefSeq assembly accession:
GCF_902162035.1 (latest)
RefSeq assembly and GenBank assembly identical:
yes
WGS Project:
CABGTU01
Genome coverage:
79x

IDs: 3802611 [UID] 12036628 [GenBank] 12310568 [RefSeq]

See Genome Information for Enterococcus faecalis

There are 8874 assemblies for this organism

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History (Show revision history)

Comment

Global statistics

Total sequence length3,080,990
Total ungapped length3,080,183
Gaps between scaffolds0
Number of scaffolds37
Scaffold N50373,208
Scaffold L503
Number of contigs41
Contig N50284,490
Contig L504
Total number of chromosomes and plasmids0
Number of component sequences (WGS or clone)37

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Global assembly definition

Download the full sequence report
Click on the table row to see sequence details in the table to the right
Assembly Unit Name
Primary Assembly
The primary assembly unit does not have any assembled chromosomes or linkage groups.
Please download the full sequence report for information on the scaffolds.

Assembly statistics

MoleculeTotal
Length
Scaffold
Count
Ungapped
Length
Scaffold
N50
Spanned
Gaps
Unspanned
Gaps
unplaced3,080,990373,080,183373,20840

Assembly QA

Taxonomy Check Data

Declared organism

Organism nameSpecies name
Enterococcus faecalisEnterococcus faecalis

Best-matching type-strain assembly for declared species

AssemblyOrganism nameType category
GCA_022869705.1Enterococcus faecalistype

Best-matching type-strain assembly

AssemblySpecies nameType category
GCA_022869705.1Enterococcus faecalistype

Average Nucleotide Identity (ANI) data

ANIQuery coverageSubject coverage
Declared type99.1684.8591.16
Best-match type99.1684.8591.16

ANI result

Taxonomy check statusBest match statusComment
OKspecies-matchna