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25426_7#200

Organism name:
Enterococcus faecium (firmicutes)
Taxonomy check:
OK
Infraspecific name:
Strain: 4928STDY7071455
BioSample:
SAMEA104567563
BioProject:
PRJEB22252
Submitter:
SC
Date:
2019/07/08
Assembly type:
na
Assembly level:
Contig
Genome representation:
full
GenBank assembly accession:
GCA_902160635.1 (latest)
RefSeq assembly accession:
GCF_902160635.1 (latest)
RefSeq assembly and GenBank assembly identical:
yes
WGS Project:
CABGOP01
Genome coverage:
95x

IDs: 3801221 [UID] 12033848 [GenBank] 12155038 [RefSeq]

See Genome Information for Enterococcus faecium

There are 23391 assemblies for this organism

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History (Show revision history)

Comment

Global statistics

Total sequence length2,785,832
Total ungapped length2,785,832
Number of contigs74
Contig N50126,700
Contig L508
Total number of chromosomes and plasmids0
Number of component sequences (WGS or clone)74

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Global assembly definition

Download the full sequence report
Click on the table row to see sequence details in the table to the right
Assembly Unit Name
Primary Assembly
The primary assembly unit does not have any assembled chromosomes or linkage groups.
Please download the full sequence report for information on the scaffolds.

Assembly statistics

MoleculeTotal
Length
Contig
Count
Ungapped
Length
Contig
N50
Spanned
Gaps
Unspanned
Gaps
unplaced2,785,832742,785,832126,70000

Assembly QA

Taxonomy Check Data

Declared organism

Organism nameSpecies name
Enterococcus faeciumEnterococcus faecium

Best-matching type-strain assembly for declared species

AssemblyOrganism nameType category
GCA_026953455.1Enterococcus faeciumtype

Best-matching type-strain assembly

AssemblySpecies nameType category
GCA_015904215.1Enterococcus lactistype

Average Nucleotide Identity (ANI) data

ANIQuery coverageSubject coverage
Declared type95.0381.1486.53
Best-match type98.9089.8885.90

ANI result

Taxonomy check statusBest match statusComment
OKsynonym-matchna