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25426_7#175

Organism name:
Enterococcus durans (firmicutes)
Taxonomy check:
OK
Infraspecific name:
Strain: 4928STDY7071424
BioSample:
SAMEA104567532
BioProject:
PRJEB22252
Submitter:
SC
Date:
2019/07/08
Assembly type:
na
Assembly level:
Scaffold
Genome representation:
full
GenBank assembly accession:
GCA_902160425.1 (latest)
RefSeq assembly accession:
GCF_902160425.1 (latest)
RefSeq assembly and GenBank assembly identical:
yes
WGS Project:
CABGNP01
Genome coverage:
128x

IDs: 3801011 [UID] 12033428 [GenBank] 12294848 [RefSeq]

See Genome Information for Enterococcus durans

There are 168 assemblies for this organism

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History (Show revision history)

Comment

Global statistics

Total sequence length2,993,992
Total ungapped length2,993,902
Gaps between scaffolds0
Number of scaffolds134
Scaffold N5066,221
Scaffold L5014
Number of contigs135
Contig N5066,221
Contig L5014
Total number of chromosomes and plasmids0
Number of component sequences (WGS or clone)134

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Global assembly definition

Download the full sequence report
Click on the table row to see sequence details in the table to the right
Assembly Unit Name
Primary Assembly
The primary assembly unit does not have any assembled chromosomes or linkage groups.
Please download the full sequence report for information on the scaffolds.

Assembly statistics

MoleculeTotal
Length
Scaffold
Count
Ungapped
Length
Scaffold
N50
Spanned
Gaps
Unspanned
Gaps
unplaced2,993,9921342,993,90266,22110

Assembly QA

Taxonomy Check Data

Declared organism

Organism nameSpecies name
Enterococcus duransEnterococcus durans

Best-matching type-strain assembly for declared species

AssemblyOrganism nameType category
GCA_019048325.1Enterococcus duranstype

Best-matching type-strain assembly

AssemblySpecies nameType category
GCA_019048325.1Enterococcus duranstype

Average Nucleotide Identity (ANI) data

ANIQuery coverageSubject coverage
Declared type99.4790.1687.20
Best-match type99.4790.1687.20

ANI result

Taxonomy check statusBest match statusComment
OKspecies-matchna