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25426_7#71

Organism name:
Staphylococcus epidermidis (firmicutes)
Taxonomy check:
OK
Infraspecific name:
Strain: 4928STDY7071606
BioSample:
SAMEA104567711
BioProject:
PRJEB22252
Submitter:
SC
Date:
2019/07/08
Assembly type:
na
Assembly level:
Contig
Genome representation:
full
GenBank assembly accession:
GCA_902159425.1 (latest)
RefSeq assembly accession:
GCF_902159425.1 (latest)
RefSeq assembly and GenBank assembly identical:
yes
WGS Project:
CABGJO01
Genome coverage:
165x

IDs: 3796131 [UID] 12023708 [GenBank] 12153198 [RefSeq]

See Genome Information for Staphylococcus epidermidis

There are 4822 assemblies for this organism

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History (Show revision history)

Comment

Global statistics

Total sequence length2,435,950
Total ungapped length2,435,950
Number of contigs40
Contig N50169,744
Contig L506
Total number of chromosomes and plasmids0
Number of component sequences (WGS or clone)40

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Global assembly definition

Download the full sequence report
Click on the table row to see sequence details in the table to the right
Assembly Unit Name
Primary Assembly
The primary assembly unit does not have any assembled chromosomes or linkage groups.
Please download the full sequence report for information on the scaffolds.

Assembly statistics

MoleculeTotal
Length
Contig
Count
Ungapped
Length
Contig
N50
Spanned
Gaps
Unspanned
Gaps
unplaced2,435,950402,435,950169,74400

Assembly QA

Taxonomy Check Data

Declared organism

Organism nameSpecies name
Staphylococcus epidermidisStaphylococcus epidermidis

Best-matching type-strain assembly for declared species

AssemblyOrganism nameType category
GCA_006094375.1Staphylococcus epidermidistype

Best-matching type-strain assembly

AssemblySpecies nameType category
GCA_006094375.1Staphylococcus epidermidistype

Average Nucleotide Identity (ANI) data

ANIQuery coverageSubject coverage
Declared type99.5595.9693.84
Best-match type99.5595.9693.84

ANI result

Taxonomy check statusBest match statusComment
OKspecies-matchna