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SRS011134_97

Organism name:
Bacteroidales bacterium (CFB group bacteria)
Taxonomy check:
Inconclusive
Isolate:
HGM05295
BioSample:
SAMEA5278731
BioProject:
PRJEB31003
Submitter:
DOE JGI
Date:
2020/06/26
Assembly type:
na
Assembly level:
Contig
Genome representation:
full
Excluded from RefSeq:
  • derived from metagenome
  • genus undefined
GenBank assembly accession:
GCA_900759895.1 (latest)
RefSeq assembly accession:
GCF_900759895.1 (suppressed)
RefSeq assembly and GenBank assembly identical:
yes
WGS Project:
CAAEWY01
Genome coverage:
33x

IDs: 7313331 [UID] 20203558 [GenBank] 20281188 [RefSeq]

See Genome Information for Bacteroidales bacterium

Pathogen Detection Resources

There are 5183 assemblies for this organism

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History (Show revision history)

Comment

Global statistics

Total sequence length2,036,782
Total ungapped length2,036,782
Number of contigs123
Contig N5026,874
Contig L5021
Total number of chromosomes and plasmids0
Number of component sequences (WGS or clone)123

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Global assembly definition

Download the full sequence report
Click on the table row to see sequence details in the table to the right
Assembly Unit Name
Primary Assembly
The primary assembly unit does not have any assembled chromosomes or linkage groups.
Please download the full sequence report for information on the scaffolds.

Assembly statistics

MoleculeTotal
Length		Contig
Count		Ungapped
Length		Contig
N50		Spanned
Gaps		Unspanned
Gaps
unplaced2,036,7821232,036,78226,87400

Assembly QA

Taxonomy Check Data

Declared organism

Organism nameSpecies name
Bacteroidales bacteriumBacteroidales bacterium

Best-matching type-strain assembly for declared species

AssemblyOrganism nameType category
no-typeno-type

Best-matching type-strain assembly

AssemblySpecies nameType category
GCA_003024805.1Duncaniella murissuspected-type

Average Nucleotide Identity (ANI) data

ANIQuery coverageSubject coverage
Declared typenanana
Best-match type81.991.400.87

ANI result

Taxonomy check statusBest match statusComment
Inconclusivelow-coveragena