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43222_E01

  • Anomalous assembly.
Organism name:
Paucimonas lemoignei (b-proteobacteria)
Taxonomy check:
Inconclusive
Infraspecific name:
Serovar: not available: to be reported later
Infraspecific name:
Strain: NCTC10937
BioSample:
SAMEA3711433
BioProject:
PRJEB6403
Submitter:
SC
Date:
2018/06/17
Assembly type:
na
Assembly level:
Complete Genome
Genome representation:
full
Assembly anomaly:
misassembled
Excluded from RefSeq:
  • misassembled
  • not used as type
GenBank assembly accession:
GCA_900475325.1 (latest)
RefSeq assembly accession:
GCF_900475325.1 (suppressed)
RefSeq assembly and GenBank assembly identical:
yes
Genome coverage:
100x

IDs: 1771231 [UID] 6714808 [GenBank] 6726558 [RefSeq]

See Genome Information for Paucimonas lemoignei

There are 2 assemblies for this organism

See more

History (Show revision history)

Comment

Global statistics

Total sequence length5,924,472
Total ungapped length5,924,472
Total number of chromosomes and plasmids1

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Global assembly definition

Download the full sequence report
Click on the table row to see sequence details in the table to the right
Assembly Unit Name
Primary Assembly
Assembly Unit: Primary Assembly (GCA_900475324.1)
Molecule nameGenBank sequenceRefSeq sequence
Chromosome 1LS483371.1=NZ_LS483371.1

Assembly statistics

MoleculeTotal
Length
Chromosome 15,924,472

Assembly QA

Taxonomy Check Data

Declared organism

Organism nameSpecies name
Paucimonas lemoigneiPaucimonas lemoignei

Best-matching type-strain assembly for declared species

AssemblyOrganism nameType category
GCA_004342585.1Paucimonas lemoigneitype

Best-matching type-strain assembly

AssemblySpecies nameType category
GCA_021147825.1Pseudomonas quasicaspianatype

Average Nucleotide Identity (ANI) data

ANIQuery coverageSubject coverage
Declared type80.670.130.19
Best-match type85.2148.6044.24

ANI result

Taxonomy check statusBest match statusComment
Inconclusivebelow-threshold-mismatchna