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ASM3306091v1

Organism name:
Euryodendron excelsum (eudicots)
Isolate:
ZXM
BioSample:
SAMN34105784
BioProject:
PRJNA953143
Submitter:
South China Botanical Garden, Chinese Academy of Sciences
Date:
2023/10/27
Assembly level:
Chromosome
Genome representation:
full
RefSeq category:
representative genome
GenBank assembly accession:
GCA_033060915.1 (latest)
RefSeq assembly accession:
n/a
RefSeq assembly and GenBank assembly identical:
n/a
WGS Project:
JARUNX01
Assembly method:
nextDenovo v. 2.3.1; pseudohaploid v. NO; Purge_Dups v. 1.2.6; racon v. 1.5.0; hapo-G v. 1.3.2; Scaffhic v. 1.1; TGS-GapCloser v. 1.2.1; Juicer v. 1.6; 3d-dna v. 201008
Expected final version:
yes
Genome coverage:
100.0x
Sequencing technology:
PacBio

IDs: 19423601 [UID] 49391878 [GenBank]

See Genome Information for Euryodendron excelsum

Pathogen Detection Resources

History (Show revision history)

Comment

Global statistics

Total sequence length1,059,895,887
Total ungapped length1,059,893,778
Gaps between scaffolds0
Number of scaffolds85
Scaffold N5046,187,585
Scaffold L5010
Number of contigs91
Contig N5042,838,020
Contig L5011
Total number of chromosomes and plasmids23
Number of component sequences (WGS or clone)85

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Assembly Information

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Global assembly definition

Download the full sequence report
Click on the table row to see sequence details in the table to the right
Assembly Unit Name
Primary Assembly
Assembly Unit: Primary Assembly (GCA_033060985.1)
Molecule nameGenBank sequenceRefSeq sequenceUnlocalized
sequences count
Chromosome 1CM065377.1n/an/a0
Chromosome 2CM065378.1n/an/a0
Chromosome 3CM065379.1n/an/a0
Chromosome 4CM065380.1n/an/a0
Chromosome 5CM065381.1n/an/a0
Chromosome 6CM065382.1n/an/a0
Chromosome 7CM065383.1n/an/a0
Chromosome 8CM065384.1n/an/a0
Chromosome 9CM065385.1n/an/a0
Chromosome 10CM065386.1n/an/a0
Chromosome 11CM065387.1n/an/a0
Chromosome 12CM065388.1n/an/a0
Chromosome 13CM065389.1n/an/a0
Chromosome 14CM065390.1n/an/a0
Chromosome 15CM065391.1n/an/a0
Chromosome 16CM065392.1n/an/a0
Chromosome 17CM065393.1n/an/a0
Chromosome 18CM065394.1n/an/a0
Chromosome 19CM065395.1n/an/a0
Chromosome 20CM065396.1n/an/a0
Chromosome 21CM065397.1n/an/a0
Chromosome 22CM065398.1n/an/a0
Chromosome 23CM065399.1n/an/a0
unplacedn/an/an/a62

Assembly statistics

MoleculeTotal
Length		Scaffold
Count		Ungapped
Length		Scaffold
N50		Spanned
Gaps		Unspanned
Gaps
All1,059,895,887851,059,893,77846,187,58560
Chromosome 181,663,620181,663,07881,663,62020
Chromosome 259,097,695159,097,69559,097,69500
Chromosome 357,154,440157,154,37357,154,44010
Chromosome 451,685,608151,685,60851,685,60800
Chromosome 550,722,015150,721,51550,722,01510
Chromosome 649,295,885149,295,88549,295,88500
Chromosome 749,169,766149,169,76649,169,76600
Chromosome 848,135,108148,135,10848,135,10800
Chromosome 947,950,987147,950,98747,950,98700
Chromosome 1046,187,585146,187,58546,187,58500
Chromosome 1145,439,022145,439,02245,439,02200
Chromosome 1243,223,648143,223,64843,223,64800
Chromosome 1342,838,020142,838,02042,838,02000
Chromosome 1441,694,067141,694,06741,694,06700
Chromosome 1540,921,354140,921,35440,921,35400
Chromosome 1640,588,000140,588,00040,588,00000
Chromosome 1739,936,808139,936,80839,936,80800
Chromosome 1839,558,878139,558,87839,558,87800
Chromosome 1939,302,046139,301,54639,302,04610
Chromosome 2037,996,672137,996,17237,996,67210
Chromosome 2136,351,011136,351,01136,351,01100
Chromosome 2234,934,372134,934,37234,934,37200
Chromosome 2332,496,238132,496,23832,496,23800
unplaced3,553,042623,553,042561,48100