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ASM2954402v1

Organism name:
Solanum habrochaites (eudicots)
Infraspecific name:
Cultivar: LA1353
BioSample:
SAMN24726767
BioProject:
PRJNA795505
Submitter:
The University of California, Berkeley
Date:
2023/04/03
Assembly type:
haploid (principal pseudohaplotype of diploid)
Assembly level:
Scaffold
Genome representation:
full
GenBank assembly accession:
GCA_029544025.1 (latest)
RefSeq assembly accession:
n/a
RefSeq assembly and GenBank assembly identical:
n/a
WGS Project:
JAKFFX01
Assembly method:
hifiasm v. 0.12
Expected final version:
yes
Genome coverage:
11x
Sequencing technology:
PacBio Sequel
Linked assembly:
GCA_029544035.1 (alternate pseudohaplotype of diploid)

IDs: 16339091 [UID] 41885018 [GenBank]

See Genome Information for Solanum habrochaites

There are 4 assemblies for this organism

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History (Show revision history)

Comment

Global statistics

Total sequence length981,160,977
Total ungapped length981,148,377
Gaps between scaffolds0
Number of scaffolds794
Scaffold N506,711,498
Scaffold L5042
Number of contigs920
Contig N504,552,626
Contig L5064
Total number of chromosomes and plasmids0
Number of component sequences (WGS or clone)794

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Global assembly definition

Download the full sequence report
Click on the table row to see sequence details in the table to the right
Assembly Unit Name
Primary Assembly
The primary assembly unit does not have any assembled chromosomes or linkage groups.
Please download the full sequence report for information on the scaffolds.

Assembly statistics

MoleculeTotal
Length
Scaffold
Count
Ungapped
Length
Scaffold
N50
Spanned
Gaps
Unspanned
Gaps
unplaced981,160,977794981,148,3776,711,4981260