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ASM2770476v1

Organism name:
Solanum habrochaites (eudicots)
Infraspecific name:
Cultivar: ZY59
BioSample:
SAMN26137364
BioProject:
PRJNA809001
Submitter:
Cornell University
Date:
2023/01/11
Assembly level:
Scaffold
Genome representation:
full
RefSeq category:
representative genome
GenBank assembly accession:
GCA_027704765.1 (latest)
RefSeq assembly accession:
n/a
RefSeq assembly and GenBank assembly identical:
n/a
WGS Project:
JAKWJA01
Assembly method:
Canu v. 1.5
Expected final version:
yes
Genome coverage:
32.42x
Sequencing technology:
PacBio

IDs: 15321331 [UID] 39448098 [GenBank]

See Genome Information for Solanum habrochaites

There are 4 assemblies for this organism

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History (Show revision history)

Comment

Global statistics

Total sequence length959,697,974
Total ungapped length959,609,992
Gaps between scaffolds0
Number of scaffolds2,500
Scaffold N5068,069,457
Scaffold L507
Number of contigs3,403
Contig N501,496,220
Contig L50176
Total number of chromosomes and plasmids0
Number of component sequences (WGS or clone)2,500

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Global assembly definition

Download the full sequence report
Click on the table row to see sequence details in the table to the right
Assembly Unit Name
Primary Assembly
The primary assembly unit does not have any assembled chromosomes or linkage groups.
Please download the full sequence report for information on the scaffolds.

Assembly statistics

MoleculeTotal
Length
Scaffold
Count
Ungapped
Length
Scaffold
N50
Spanned
Gaps
Unspanned
Gaps
unplaced959,697,9742,500959,609,99268,069,4579030