fPhoLeu1.alt

Organism name:

Pholidichthys leucotaenia (bony fishes)

Isolate:

fPhoLeu1

BioSample:

SAMN12623617

BioProject:

PRJNA749576

Submitter:

G10K

Date:

2021/10/15

Assembly type:

alternate-pseudohaplotype

Assembly level:

Scaffold

Genome representation:

full

GenBank assembly accession:

GCA_020510965.1 (latest)

RefSeq assembly accession:

n/a

RefSeq assembly and GenBank assembly identical:

n/a

WGS Project:

JAJAQG01

Assembly method:

falcon-kit v. 1.3.0; FALCON-Unzip v. 1.2.0; purge_dups v. 1.2.3; scaff10X v. 4.2; bionano Solve Solve v. 3.5_12162019; Salsa2 HiC v. 2.2; Longranger Align v. 2.2.2; pbmm2 v. 1.4.0; gcpp v. 1.0.0-1807624; bcftools v. 1.12-21-ga865a16; merfin v. 09c026d; deepvariant v. 1.1.0; gEVAL manual curation v. 2021-07-16

Expected final version:

no

Genome coverage:

98.18x

Sequencing technology:

PacBio Sequel I CLR; Illumina NovaSeq; Arima Genomics Hi-C; Bionano Genomics DLS

Linked assembly:

GCA_020510985.1 (principal pseudohaplotype of diploid)

IDs: 11222021 [UID] 29596488 [GenBank]