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HG03098.pri.mat.f1_v2

Organism name:
Homo sapiens (human)
Isolate:
HG03098
Sex:
female
BioSample:
SAMN13957944
BioProject:
PRJNA727424
Submitter:
UCSC Genomics Institute
Date:
2021/05/26
Assembly type:
haploid (maternal haplotype of diploid)
Assembly level:
Contig
Genome representation:
full
GenBank assembly accession:
GCA_018506165.1 (latest)
RefSeq assembly accession:
n/a
RefSeq assembly and GenBank assembly identical:
n/a
WGS Project:
JAHEPL01
Assembly method:
Hifiasm v. 0.14
Expected final version:
no
Genome coverage:
42x
Sequencing technology:
PacBio Sequel
Linked assembly:
GCA_018506155.1 (paternal haplotype of diploid)

IDs: 10123651 [UID] 26917938 [GenBank]

See Genome Information for Homo sapiens

There are 1254 assemblies for this organism

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History (Show revision history)

Comment

Global statistics

Total sequence length3,059,522,785
Total ungapped length3,059,522,785
Number of contigs331
Contig N5036,975,063
Contig L5024
Total number of chromosomes and plasmids1
Number of component sequences (WGS or clone)331

Supplemental Content

PubMed articles for this assembly

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Global assembly definition

Download the full sequence report
Click on the table row to see sequence details in the table to the right
Assembly Unit Name
Primary Assembly
non-nuclear
The primary assembly unit does not have any assembled chromosomes or linkage groups.
Please download the full sequence report for information on the scaffolds.

Assembly statistics

MoleculeTotal
Length
Contig
Count
Ungapped
Length
Contig
N50
Spanned
Gaps
Unspanned
Gaps
unplaced3,059,506,2153303,059,506,21536,975,06300
MoleculeSequence RoleTotal
Length
Contig
Count
Ungapped
Length
Contig
N50
Spanned
Gaps
Unspanned
Gaps
Mitochondrion MTAllAssembled moleculeUnlocalized scaffolds16,570016,57010116,570016,57016,570016,570000000