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ASM1655040v1

Organism name:
archaeon (archaea)
Taxonomy check:
Inconclusive
Isolate:
H02M_Hermod_52
BioSample:
SAMN14986676
BioProject:
PRJNA629047
Submitter:
East china normal University
Date:
2021/01/06
Assembly type:
na
Assembly level:
Contig
Genome representation:
full
Excluded from RefSeq:
  • derived from metagenome
  • genus undefined
GenBank assembly accession:
GCA_016550405.1 (latest)
RefSeq assembly accession:
n/a
RefSeq assembly and GenBank assembly identical:
n/a
WGS Project:
JABXGX01
Assembly method:
MEGAHIT v. v 1.1.4
Expected final version:
yes
Genome coverage:
25x
Sequencing technology:
Illumina HiSeq 2500

IDs: 9083051 [UID] 24464158 [GenBank]

See Genome Information for archaeon

There are 512 assemblies for this organism

See more

History (Show revision history)

Comment

Global statistics

Total sequence length2,677,422
Total ungapped length2,677,422
Number of contigs357
Contig N5011,896
Contig L5065
Total number of chromosomes and plasmids0
Number of component sequences (WGS or clone)357

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Global assembly definition

Download the full sequence report
Click on the table row to see sequence details in the table to the right
Assembly Unit Name
Primary Assembly
The primary assembly unit does not have any assembled chromosomes or linkage groups.
Please download the full sequence report for information on the scaffolds.

Assembly statistics

MoleculeTotal
Length
Contig
Count
Ungapped
Length
Contig
N50
Spanned
Gaps
Unspanned
Gaps
unplaced2,677,4223572,677,42211,89600

Assembly QA

Taxonomy Check Data

Declared organism

Organism nameSpecies name
archaeonarchaeon

Best-matching type-strain assembly for declared species

AssemblyOrganism nameType category
no-typeno-type

Best-matching type-strain assembly

AssemblySpecies nameType category
none-foundnana

Average Nucleotide Identity (ANI) data

ANIQuery coverageSubject coverage
Declared typenanana
Best-match typena0.000.00

ANI result

Taxonomy check statusBest match statusComment
Inconclusivenana