bNycGra1.alt

Organism name:

Nyctibius grandis (birds)

Isolate:

bNycGra1

Sex:

female

BioSample:

SAMN12622411

BioProject:

PRJNA562021

Submitter:

Vertebrate Genomes Project

Date:

2020/06/23

Assembly type:

alternate-pseudohaplotype

Assembly level:

Scaffold

Genome representation:

full

GenBank assembly accession:

GCA_013368595.1 (latest)

RefSeq assembly accession:

n/a

RefSeq assembly and GenBank assembly identical:

n/a

WGS Project:

JABXNW01

Assembly method:

FALCON 1.3.0 v. 2018.31.08-03.06; FALCON-Unzip v. 1.2.0 6.0.0.47841; purge_dups v. github ca23030ccf4254dfd2d3a5ea90d0eed41c24f88b; bionano Solve v. 3.2.1_04122018; Salsa2 HiC v. 2.2; Arrow polishing and gap filling v. SMRTLink7.0.1; Longranger Align v. 2.2.2; freebayes v. 1.3.1; gEVAL manual curation v. 2020-03-02; VGP assembly pipeline v. 1.6

Expected final version:

no

Genome coverage:

88.4x

Sequencing technology:

PacBio Sequel I CLR; Illumina NovaSeq; Arima Genomics Hi-C; Bionano Genomics DLS

Linked assembly:

GCA_013368605.1 (principal pseudohaplotype of diploid)

IDs: 7292991 [UID] 20129638 [GenBank]