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ASM436787v1

Organism name:
Oikopleura albicans (tunicates)
Isolate:
PointB-2012
Sex:
male
BioSample:
SAMN10688971
BioProject:
PRJNA512633
Submitter:
University of Bergen
Date:
2019/03/25
Assembly level:
Scaffold
Genome representation:
full
RefSeq category:
representative genome
GenBank assembly accession:
GCA_004367875.1 (latest)
RefSeq assembly accession:
n/a
RefSeq assembly and GenBank assembly identical:
n/a
WGS Project:
SCLG01
Assembly method:
PLATANUS v. 1.2.1; CANU v. 1.8; SSPACE-BASIC v. 2.0; SSPACE-LongRead v. 1.1
Expected final version:
yes
Genome coverage:
126.0x
Sequencing technology:
Illumina HiSeq; PacBio RSII

IDs: 2354891 [UID] 8776398 [GenBank]

See Genome Information for Oikopleura albicans

History (Show revision history)

Comment

Global statistics

Total sequence length365,958,051
Total ungapped length351,474,600
Gaps between scaffolds0
Number of scaffolds92,906
Scaffold N50213,763
Scaffold L50321
Number of contigs120,087
Contig N5010,311
Contig L508,140
Total number of chromosomes and plasmids0
Number of component sequences (WGS or clone)92,906

Supplemental Content

PubMed articles for this assembly

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Global assembly definition

Download the full sequence report
Click on the table row to see sequence details in the table to the right
Assembly Unit Name
Primary Assembly
The primary assembly unit does not have any assembled chromosomes or linkage groups.
Please download the full sequence report for information on the scaffolds.

Assembly statistics

MoleculeTotal
Length
Scaffold
Count
Ungapped
Length
Scaffold
N50
Spanned
Gaps
Unspanned
Gaps
unplaced365,958,05192,906351,474,600213,76327,1810