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ASM277923v1

Organism name:
Candidatus Woesearchaeota archaeon CG07_land_8_20_14_0_80_44_23 (archaea)
Taxonomy check:
Inconclusive
Isolate:
CG07_land_8_20_14_0_80_44_23
BioSample:
SAMN06659256
BioProject:
PRJNA362739
Submitter:
None
Date:
2017/11/16
Assembly type:
na
Assembly level:
Scaffold
Genome representation:
full
Excluded from RefSeq:
  • derived from metagenome
  • genus undefined
GenBank assembly accession:
GCA_002779235.1 (latest)
RefSeq assembly accession:
n/a
RefSeq assembly and GenBank assembly identical:
n/a
WGS Project:
PEXD01
Assembly method:
IDBA-UD v. 02.2016
Expected final version:
yes
Genome coverage:
10x
Sequencing technology:
Illumina HiSeq

IDs: 1443171 [UID] 5659938 [GenBank]

See Genome Information for Candidatus Woesearchaeota archaeon CG07_land_8_20_14_0_80_44_23

History (Show revision history)

Comment

Annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (released 2013). Information about the Pipeline can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/

Genome-Annotation-Data

##Genome-Annotation-Data-START##
Annotation Provider::NCBI
Annotation Date::11/07/2017 14:46:11
Annotation Pipeline::NCBI Prokaryotic Genome Annotation Pipeline
Annotation Method::Best-placed reference protein set; GeneMarkS+
Annotation Software revision::4.2
Features Annotated::Gene; CDS; rRNA; tRNA; ncRNA; repeat_region
Genes (total)::1,024
CDS (total)::983
Genes (coding)::975
CDS (coding)::975
Genes (RNA)::41
rRNAs::1, 1, 1 (5S, 16S, 23S)
complete rRNAs::1, 1, 1 (5S, 16S, 23S)
tRNAs::36
ncRNAs::2
Pseudo Genes (total)::8
Pseudo Genes (ambiguous residues)::0 of 8
Pseudo Genes (frameshifted)::0 of 8
Pseudo Genes (incomplete)::8 of 8
Pseudo Genes (internal stop)::0 of 8
##Genome-Annotation-Data-END##

Global statistics

Total sequence length923,120
Total ungapped length922,490
Gaps between scaffolds0
Number of scaffolds84
Scaffold N5012,393
Scaffold L5023
Number of contigs93
Contig N5011,036
Contig L5024
Total number of chromosomes and plasmids0
Number of component sequences (WGS or clone)84

Supplemental Content

PubMed articles for this assembly

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Global assembly definition

Download the full sequence report
Click on the table row to see sequence details in the table to the right
Assembly Unit Name
Primary Assembly
The primary assembly unit does not have any assembled chromosomes or linkage groups.
Please download the full sequence report for information on the scaffolds.

Assembly statistics

MoleculeTotal
Length
Scaffold
Count
Ungapped
Length
Scaffold
N50
Spanned
Gaps
Unspanned
Gaps
unplaced923,12084922,49012,39390

Assembly QA

Taxonomy Check Data

Declared organism

Organism nameSpecies name
Candidatus Woesearchaeota archaeon CG07_land_8_20_14_0_80_44_23Candidatus Woesearchaeota archaeon CG07_land_8_20_14_0_80_44_23

Best-matching type-strain assembly for declared species

AssemblyOrganism nameType category
no-typeno-type

Best-matching type-strain assembly

AssemblySpecies nameType category
none-foundnana

Average Nucleotide Identity (ANI) data

ANIQuery coverageSubject coverage
Declared typenanana
Best-match typena0.000.00

ANI result

Taxonomy check statusBest match statusComment
Inconclusivenana