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ASM72532v1

Organism name:
Bacillus anthracis (firmicutes)
Taxonomy check:
OK
Infraspecific name:
Strain: HYU01
BioSample:
SAMN02874036
BioProject:
PRJNA231762
Submitter:
Hanyang University
Date:
2014/07/14
Assembly type:
na
Assembly level:
Complete Genome
Genome representation:
full
GenBank assembly accession:
GCA_000725325.1 (latest)
RefSeq assembly accession:
GCF_000725325.1 (latest)
RefSeq assembly and GenBank assembly identical:
yes
Assembly method:
Newbler v. 2.6; SOAPdenovo v. 1.05
Genome coverage:
200x
Sequencing technology:
454; Illumina GAII

IDs: 195931 [UID] 1169298 [GenBank] 1492938 [RefSeq]

See Genome Information for Bacillus anthracis

There are 880 assemblies for this organism

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History (Show revision history)

Comment

The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/

Genome-Annotation-Data

##Genome-Annotation-Data-START##
Annotation Provider::NCBI RefSeq
Annotation Date::12/08/2023 02:41:20
Annotation Pipeline::NCBI Prokaryotic Genome Annotation Pipeline (PGAP)
Annotation Method::Best-placed reference protein set; GeneMarkS-2+
Annotation Software revision::6.6
Features Annotated::Gene; CDS; rRNA; tRNA; ncRNA
Genes (total)::5,754
CDSs (total)::5,623
Genes (coding)::5,235
CDSs (with protein)::5,235
Genes (RNA)::131
rRNAs::10, 10, 10 (5S, 16S, 23S)
complete rRNAs::10, 10, 10 (5S, 16S, 23S)
tRNAs::96
ncRNAs::5
Pseudo Genes (total)::388
CDSs (without protein)::388
Pseudo Genes (ambiguous residues)::0 of 388
Pseudo Genes (frameshifted)::253 of 388
Pseudo Genes (incomplete)::96 of 388
Pseudo Genes (internal stop)::100 of 388
Pseudo Genes (multiple problems)::52 of 388
##Genome-Annotation-Data-END##

Global statistics

Total sequence length5,490,124
Total ungapped length5,490,124
Total number of chromosomes and plasmids3

Supplemental Content

PubMed articles for this assembly

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Global assembly definition

Download the full sequence report
Click on the table row to see sequence details in the table to the right
Assembly Unit Name
Primary Assembly
Assembly Unit: Primary Assembly (GCF_000725335.1)
Molecule nameGenBank sequenceRefSeq sequence
Chromosome CP008846.1=NZ_CP008846.1
Plasmid pX01CP008847.1=NZ_CP008847.1
Plasmid pX02CP008848.1=NZ_CP008848.1

Assembly statistics

MoleculeTotal
Length
All5,490,124
Chromosome 5,213,498
Plasmid pX01181,894
Plasmid pX0294,732

Assembly QA

Taxonomy Check Data

Declared organism

Organism nameSpecies name
Bacillus anthracisBacillus anthracis

Best-matching type-strain assembly for declared species

AssemblyOrganism nameType category
GCA_022221345.1Bacillus anthracistype

Best-matching type-strain assembly

AssemblySpecies nameType category
GCA_022221345.1Bacillus anthracistype

Average Nucleotide Identity (ANI) data

ANIQuery coverageSubject coverage
Declared type99.9399.9499.64
Best-match type99.9399.9499.64

ANI result

Taxonomy check statusBest match statusComment
OKspecies-matchna