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IDs: 369508 [UID] 199818 [GenBank] 369508 [RefSeq]
The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ URL -- http://www.jgi.doe.gov JGI Project ID: 4086749 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and ... Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376) more
##Genome-Annotation-Data-START##Annotation Provider::NCBI RefSeqAnnotation Name::GCF_000164905.1-RS_2024_05_05Annotation Date::05/05/2024 13:37:42Annotation Pipeline::NCBI Prokaryotic Genome Annotation Pipeline (PGAP)Annotation Method::Best-placed reference protein set; GeneMarkS-2+Annotation Software revision::6.7Features Annotated::Gene; CDS; rRNA; tRNA; ncRNAGenes (total)::1,957CDSs (total)::1,908Genes (coding)::1,899CDSs (with protein)::1,899Genes (RNA)::49rRNAs::1, 1, 1 (5S, 16S, 23S)complete rRNAs::1, 1, 1 (5S, 16S, 23S)tRNAs::44ncRNAs::2Pseudo Genes (total)::9CDSs (without protein)::9Pseudo Genes (ambiguous residues)::0 of 9Pseudo Genes (frameshifted)::3 of 9Pseudo Genes (incomplete)::6 of 9Pseudo Genes (internal stop)::1 of 9Pseudo Genes (multiple problems)::1 of 9CRISPR Arrays::1##Genome-Annotation-Data-END##
##MIGS-Data-START##investigation_type::bacteria_archaeaproject_name::Hydrogenobacter thermophilus TK-6, DSM 6534collection_date::Missinglat_lon::34.856 138.938depth::Missingalt_elev::Missingcountry::Japanenvironment::Missingnum_replicons::Missingref_biomaterial::DSM 06534, IAM 12695biotic_relationship::Free livingtrophic_level::Missingrel_to_oxygen::Missingisol_growth_condt::Missingsequencing_meth::WGSassembly::Newbler v. 2.3 (pre-release)finishing_strategy::FinishedGOLD Stamp ID::Gi03025Type Strain::YesGreengenes ID::1208Funding Program::DOE-GEBA 2007Isolation Site::Soil near hot-spring in Izu Peninsula, JapanTemperature Range::ThermophileTemperature Optimum::70CGram Staining::Gram-Diseases::None##MIGS-Data-END##
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