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ASM275439v1

Organism name:
Delftia sp. 60 (b-proteobacteria)
Taxonomy check:
OK
Infraspecific name:
Strain: 60
BioSample:
SAMN07626146
BioProject:
PRJNA402423
Submitter:
DOE Joint Genome Institute
Date:
2017/11/03
Assembly type:
na
Assembly level:
Contig
Genome representation:
full
GenBank assembly accession:
GCA_002754395.1 (latest)
RefSeq assembly accession:
GCF_002754395.1 (latest)
RefSeq assembly and GenBank assembly identical:
yes
WGS Project:
PEFD01
Assembly method:
HGAP v. 2.3.0
Expected final version:
no
Genome coverage:
80.0x
Sequencing technology:
PacBio

IDs: 1430651 [UID] 5620118 [GenBank] 5629378 [RefSeq]

See Genome Information for Delftia sp. 60

History (Show revision history)

Comment

Global statistics

Total sequence length6,379,696
Total ungapped length6,379,696
Number of contigs1
Contig N506,379,696
Contig L501
Total number of chromosomes and plasmids0
Number of component sequences (WGS or clone)1

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Global assembly definition

Download the full sequence report
Click on the table row to see sequence details in the table to the right
Assembly Unit Name
Primary Assembly
The primary assembly unit does not have any assembled chromosomes or linkage groups.
Please download the full sequence report for information on the scaffolds.

Assembly statistics

MoleculeTotal
Length
Contig
Count
Ungapped
Length
Contig
N50
Spanned
Gaps
Unspanned
Gaps
unplaced6,379,69616,379,6966,379,69600

Assembly QA

Taxonomy Check Data

Declared organism

Organism nameSpecies name
Delftia sp. 60Delftia sp. 60

Best-matching type-strain assembly for declared species

AssemblyOrganism nameType category
no-typeno-type

Best-matching type-strain assembly

AssemblySpecies nameType category
GCA_016127415.1Delftia acidovoranstype

Average Nucleotide Identity (ANI) data

ANIQuery coverageSubject coverage
Declared typenanana
Best-match type97.9590.1784.64

ANI result

Taxonomy check statusBest match statusComment
OKgenus-matchna