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Taxonomy

Rattus norvegicus

Norway rat (Rattus norvegicus) is a species of rodent in the family Muridae that is widely used as an experimental model organism.

Taxonomy ID: 10116

Search results

Items: 14

  • Filters activated: Latest, Exclude anomalous. Clear all to show 22 items.
1.

GRCr8

Organism:
Rattus norvegicus (Norway rat)
Infraspecific name:
Strain: BN/NHsdMcwi
Sex:
male
Submitter:
Genome Reference Consortium
Date:
2024/01/31
Assembly level:
Chromosome
Genome representation:
full
RefSeq category:
representative genome
GenBank assembly accession:
GCA_036323735.1 (latest)
RefSeq assembly accession:
GCF_036323735.1 (latest)
IDs:
21208941 [UID] 53372518 [GenBank] 53525908 [RefSeq]
2.

UTH_Rnor_SHRSP_BbbUtx_1.0

Organism:
Rattus norvegicus (Norway rat)
Infraspecific name:
Strain: SHRSP/BbbUtx
Sex:
male
Submitter:
Inbred Rat Genome Sequencing Project (UTH/UK/UofL)
Date:
2022/01/24
Assembly level:
Chromosome
Genome representation:
full
GenBank assembly accession:
GCA_021556685.1 (latest)
RefSeq assembly accession:
n/a
IDs:
11802231 [UID] 31069348 [GenBank]
3.

UTH_Rnor_WKY_Bbb_1.0

Organism:
Rattus norvegicus (Norway rat)
Infraspecific name:
Strain: WKY/Bbb RGD_1581635
Sex:
male
Submitter:
Inbred Rat Genome Sequencing Project (UTH/UK/UofL)
Date:
2022/05/25
Assembly level:
Chromosome
Genome representation:
full
GenBank assembly accession:
GCA_023515805.1 (latest)
RefSeq assembly accession:
n/a
IDs:
12837471 [UID] 33530128 [GenBank]
4.

UTH_Rnor_SHR_Utx_2.0

Organism:
Rattus norvegicus (Norway rat)
Infraspecific name:
Strain: SHR/Utx RGD_8142385
Sex:
male
Submitter:
Inbred Rat Genome Sequencing Project (UTH/UK/UofL)
Date:
2024/02/29
Assembly level:
Chromosome
Genome representation:
full
GenBank assembly accession:
GCA_023515785.2 (latest)
RefSeq assembly accession:
n/a
IDs:
21576811 [UID] 54318718 [GenBank]
5.

mRatBN7.2

Organism:
Rattus norvegicus (Norway rat)
Infraspecific name:
Strain: BN/NHsdMcwi
Sex:
male
Submitter:
Wellcome Sanger Institute
Date:
2020/11/10
Assembly type:
haploid (principal pseudohaplotype of diploid)
Assembly level:
Chromosome
Genome representation:
full
GenBank assembly accession:
GCA_015227675.2 (latest)
RefSeq assembly accession:
GCF_015227675.2 (suppressed)
Release type:
Minor
Excluded from RefSeq:
superseded by newer assembly for species
IDs:
9079111 [UID] 24462838 [GenBank] 24464048 [RefSeq]
6.

Rnor_6.0

Organism:
Rattus norvegicus (Norway rat)
Infraspecific name:
Strain: mixed
Sex:
pooled males and females
Submitter:
Rat Genome Sequencing Consortium
Date:
2014/07/01
Assembly level:
Chromosome
Genome representation:
full
Synonyms:
rn6
GenBank assembly accession:
GCA_000001895.4 (latest)
RefSeq assembly accession:
GCF_000001895.5 (suppressed)
Excluded from RefSeq:
superseded by newer assembly for species
IDs:
191871 [UID] 1156538 [GenBank] 1174938 [RefSeq]
7.

Rn_Celera

Organism:
Rattus norvegicus (Norway rat)
Infraspecific name:
Strain: BN; Sprague-Dawley
Submitter:
Celera Genomics
Date:
2006/12/06
Assembly level:
Chromosome
Genome representation:
full
GenBank assembly accession:
GCA_000002265.1 (latest)
RefSeq assembly accession:
GCF_000002265.2 (suppressed)
Excluded from RefSeq:
superseded by newer assembly for species
IDs:
5448 [UID] 280818 [GenBank] 5448 [RefSeq]
8.

mRatBN7.1 alternate haplotype

Organism:
Rattus norvegicus (Norway rat)
Infraspecific name:
Strain: BN/NHsdMcwi
Sex:
male
Submitter:
Wellcome Sanger Institute
Date:
2020/11/04
Assembly type:
alternate-pseudohaplotype (alternate pseudohaplotype of diploid)
Assembly level:
Scaffold
Genome representation:
full
GenBank assembly accession:
GCA_015244455.1 (latest)
RefSeq assembly accession:
n/a
Excluded from RefSeq:
genome length too small
IDs:
8421611 [UID] 22926438 [GenBank]
9.

ASM18071v1

Organism:
Rattus norvegicus (Norway rat)
Infraspecific name:
Strain: SHRSP/Bbb
Submitter:
STAR - a SNP and haplotype map for the rat
Date:
2007/04/10
Assembly level:
Scaffold
Genome representation:
partial
GenBank assembly accession:
GCA_000180715.1 (latest)
RefSeq assembly accession:
n/a
Excluded from RefSeq:
partial
IDs:
228418 [UID] 228418 [GenBank]
10.

ASM18079v1

Organism:
Rattus norvegicus (Norway rat)
Infraspecific name:
Strain: WKY/Bbb
Submitter:
STAR - a SNP and haplotype map for the rat
Date:
2007/04/10
Assembly level:
Scaffold
Genome representation:
partial
GenBank assembly accession:
GCA_000180795.1 (latest)
RefSeq assembly accession:
n/a
Excluded from RefSeq:
partial
IDs:
228498 [UID] 228498 [GenBank]
11.

ASM18077v1

Organism:
Rattus norvegicus (Norway rat)
Submitter:
STAR - a SNP and haplotype map for the rat
Date:
2007/04/10
Assembly level:
Contig
Genome representation:
partial
GenBank assembly accession:
GCA_000180775.1 (latest)
RefSeq assembly accession:
n/a
Excluded from RefSeq:
partial
IDs:
228478 [UID] 228478 [GenBank]
12.

ASM18103v1

Organism:
Rattus norvegicus (Norway rat)
Infraspecific name:
Strain: GK/Ox
Submitter:
STAR - a SNP and haplotype map for the rat
Date:
2007/04/10
Assembly level:
Contig
Genome representation:
partial
GenBank assembly accession:
GCA_000181035.1 (latest)
RefSeq assembly accession:
n/a
Excluded from RefSeq:
partial
IDs:
228738 [UID] 228738 [GenBank]
13.

ASM18101v1

Organism:
Rattus norvegicus (Norway rat)
Infraspecific name:
Strain: SS/JrNhsd
Submitter:
STAR - a SNP and haplotype map for the rat
Date:
2007/04/10
Assembly level:
Scaffold
Genome representation:
partial
GenBank assembly accession:
GCA_000181015.1 (latest)
RefSeq assembly accession:
n/a
Excluded from RefSeq:
partial
IDs:
228718 [UID] 228718 [GenBank]
14.

rnor5.0_scrapheap

Organism:
Rattus norvegicus (Norway rat)
Submitter:
NKI
Date:
2016/01/28
Assembly level:
Scaffold
Genome representation:
partial
GenBank assembly accession:
GCA_900014975.1 (latest)
RefSeq assembly accession:
n/a
Excluded from RefSeq:
partial
IDs:
1122901 [UID] 4561518 [GenBank]
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