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Taxonomy browser (Ehrlichia chaffeensis)

Ehrlichia chaffeensis

Taxonomy ID: 945 (for references in articles please use NCBI:txid945)
current name
Ehrlichia chaffeensis Anderson et al. 1992 emend. Dumler et al. 2001
type strain of Ehrlichia chaffeensis: ATCC:CRL-10679, personal::Arkansas
NCBI BLAST name: a-proteobacteria
Rank: species
Genetic code: Translation table 11 (Bacterial, Archaeal and Plant Plastid)
Lineage( full )
cellular organisms; Bacteria; Pseudomonadota; Alphaproteobacteria; Rickettsiales; Anaplasmataceae; Ehrlichia; canis group
   Entrez records   
Database name Subtree links Direct links Links from type
Nucleotide 532 466 72
Protein 10,171 1,988 -
Structure 17 - -
Genome 1 1 -
Popset 20 20 -
Conserved Domains 6 2 -
GEO Datasets 114 6 -
PubMed Central 1,834 1,834 -
Gene 1,160 1 -
SRA Experiments 150 42 -
Protein Clusters 753 753 -
Identical Protein Groups 2,604 1,840 -
BioProject 27 8 -
BioSample 107 49 4
Assembly 8 - -
PubChem BioAssay 2 2 -
Taxonomy 10 1 -

Comments and References:

Anderson BE et al. (1991)
Anderson, B.E., Dawson, J.E., Jones, D.C., and Wilson, K.H. "Ehrlichia chaffeensis, a new species associated with human ehrlichiosis." J. Clin. Microbiol. (1991) 29:2838-2842.
VALIDATION LIST No. 41 (1992)
VALIDATION LIST No. 41. Int. J. Syst. Bacteriol. (1992) 42:327-328.
Dumler JS et al. (2001)
Dumler, J.S., Barbet, A.F., Bekker, C.P.J., Dasch, G.A., Palmer, G.H., Ray, S.C., Rikihisa, Y., and Rurangirwa, F.R. "Reorganization of genera in the families Rickettsiaceae and Anaplasmataceae in the order Rickettsiales: unification of some species of Ehrlichia with Anaplasma, Cowdria with Ehrlichia and Ehrlichia with Neorickettsia, description of six new species combinations and designation of Ehrlichia equi and 'HGE agent' as subjective synonyms of Ehrlichia phagocytophila." Int. J. Syst. Evol. Microbiol. (2001) 51:2145-2165.

External Information Resources (NCBI LinkOut)

LinkOut Subject LinkOut Provider
Ehrlichia chaffeensis Anderson et al., 1992 taxonomy/phylogenetic Encyclopedia of life
Show Biotic Interactions taxonomy/phylogenetic Global Biotic Interactions
Related Immune Epitope Information gene/protein/disease-specific Immune Epitope Database and Analysis Resource
Ehrlichia chaffeensis | SeqCode Registry taxonomy/phylogenetic SeqCode Registry
Notes:
Groups interested in participating in the LinkOut program should visit the LinkOut home page.
A list of our current non-bibliographic LinkOut providers can be found here.

Information from sequence entries

Organism modifiers

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strain
0214 [1] 529-3 [1 1 1] 543-6 [1 1 1] 590-4 [1 1 1]
606-1 [1 1 1] 91HE17 [3 2] AH-GD-HME-S11 [1 1] AH-GD-HME-S24 [1 1]
AH-GD-HME-S35 [1 1] AH-GD-HMES6 [1 1] AH-MG-HME-S16 [1 1] AH-MG-HME-S28 [1 1]
Akansas [1 1] Arkansas [2 107 15 2604 532 20 1399 150 1] BJ-MY-HME-S30 [1 1] BJ-MY-HME-S35 [1 1]
BJ-MY-HME-S49 [1 1] BJ-MY-HME-S55 [1 1] BJ-MY-HME-S58 [1 1] BJ-TZ-HME-O44 [1 1]
BJ-YQ-HME-O1 [1 1] BJ-YQ-HME-O10 [1 1] BJ-YQ-HME-O16 [1 1] BJ-YQ-HME-O18 [1 1]
BJ-YQ-HME-O22 [1 1] BJ-YQ-HME-O24 [1 1] BJ-YQ-HME-O26 [1 1] BJ-YQ-HME-O3 [1 1]
BJ-YQ-HME-O32 [1 1] BJ-YQ-HME-O4 [1 1] BJ-YQ-HME-S29 [1 1] CC228-02 [1 1 1]
CC343-02 [1 1 1] CC377-02 [1 1 1] DAT9 [1] Deer-12 [1]
Deer-3 [1] E1058 [1 1 1] E1059 [1 1 1] E521 [1 1 1]
E890 [1 1 1] E897 [1 1 1] E905 [1 1 1] E914 [1 1 1]
E915 [1 1 1] E937 [1 1 1] GIB06-09_ECF [1] H02-66 [1 1 1]
H02-68 3rep [1 1 1] H02-68 4rep [1 1 1] H02-72 [1 1 1] HLEC002 [1]
HLEC081 [1] Ibadan_A70 [1] Jax [2 1 1145 6 993 6] Karamoja 53_7 [1]
Liberty [2 1 13 1143 5 992 8] MW001 [1 1] MW002 [1 1] NY1fi [1 1]
OSLN2 [1 1] Osceola [2 1 1149 3 989 6] RX001 [1 1] RX003 [1 1]
SG24_HL [1] SG32_HL [1] SG38_HL [1] SNU-EC3 [1]
SNU-EC5 [1] Sapulpa [1 1 1 6 5] Seong Nam-Korea 06-27 [1] Shawan pet dog [1]
Shawan-tick [1] Shihezi pet dog [1] Shihezi-tick [1] St. Vincent [5 5]
St.Vincent [5 5] V1 [1 1] V2 [1 1] V3 (Vanderbilt) [1 1]
V4 [1 1] V5 [1 1] V6 [1 1] V7 [1 1]
V8 [2 2] V8 (Vanderbilt) [1 1] V9 [1 1] Wakulla [2 1 13 1126 8 987 8]
West Paces [2 1 3 963] XDA003 [1 1] XDB001 [1 1] XDB003 [1 1]
XDB004 [1 1] XDB007 [1 1] XDB009 [1 1] XDB013 [1 1]
XDB020 [1 1] XDB021 [1 1] XDB024 [1 1] XDB026 [1 1]
XJ-SHZB [1] XJ-SHZT [1] XJ-SWB [1] XJ-SWT [1]
YN-XD-HME-D166 [1 1] YN-XD-HME-S129 [1 1] YN-XD-HME-S132 [1 1] YN-XD-HME-S135 [1 1]
YN-XD-HME-S139 [1 1] YN-XD-HME-S141 [1 1] YN-XD-HME-S145 [1 1] YN-XD-HME-S149 [1 1]
YN-XD-HME-S150 [1 1] YN-XD-HME-S152 [1 1] YN-XD-HME-S158 [1 1] YN-XD-HME-S160 [1 1]
pet dog [1] ticks [1]
isolate
1 [1 2] 107g [1 1] 1246 [1] 125B [1 1 1]
15B [1 1 1] 17-5-10 [1] 17-5-17 [1] 2 [1 2]
22B [1 1 1] 2A [2 1] 3 [1 2] 4 [1 1]
40S [1 1 1] 59GEWMA5-6 [1 1] 59GEWMA9 [1 1] 6.5 [1 1 1]
601-5 3rep [1 1 1] 601-5 5rep [1 1 1] 604-2 [1 1 1] 604-5 [1 1 1]
623-4 [1 1 1] 628-5 [1 1 1] 6B [1 1] 8.1 [1 1 1]
Aa2FT08 [1 1] Aa2FT158 [2 2 2] Aa2FT17 [1 1] Aa2FT284 [1 1]
Aa2FT349 [1 2 1] Aa2FT361 [2 2 2] AaFT117 [2 2 2] AaFT168 [3 3 2]
AaFT308 [2 2 2] AaFT375 [3 3 2] AaFT377 [3 3 2] AmFT118 [1 1 1]
Arkansas [3 8] BC_1 [1 1 1] BC_2 [1 1 1] C12 [1 1]
C2 [2 2 1] C7 [2 2 1] C7tck [1 1] CR1 San Carlos [1 1]
CR2 Alajuela [1 1] CR3 Zarcero [1 1] CR4 Zarcero [1 1] CR5 Zarcero [1 1]
CdMxXo [2 1] Chattanoga [2 2] Cm048BAD [1] D11 [1 1]
E886 [1 1 1] E990 [1 1 1] EHR111ECC [1] ES 113 [1]
Ech [1] GEWMA22-24 [1 1] GEWMA33 [1 1] GEWMA38 [1 1]
GND37_17 [1] GND57_17 [1] GND66_17 [1] GND68_17 [1]
GND70_17 [1] GND71_17 [1] HE92 [1 1] Heartland [2 6]
JS50 [1 1] Jax [1 4 7] KY469 [2 1 1] KY477 [2 1 1]
L1071259 [2 1] LMR6 [1 1] Liberty [2 7] Lithonia [2 2]
MMWMA151 [1 1] MMWMA153 [1 1] MMWMA172 [1 1] MW_1 [1 1 1]
MW_2_1 [1 1 1] MW_2_2 [1 1 1] OSLN2 [1 1 1] Osciola [2 7]
RFTX1 [1 1] RFTX2 [1 1] RFTX3 [1 1] RTS_MS3 [3 2]
SC_9 [1 1 1] St. Vincent [4 6] T [4 3] TH_1 [1 1 1]
TH_2 [1 1 1] TX-Aam2 [1 1] UR_1 [1 1 1] VK32 [1]
Var1 [1 1] WHCUQA-68 [1] WHCUQL-83 [1] WHCUTP-70 [1]
WTDB02-34TX [1] WTDB03-08TX [1] WTDB03-30TX [1] WTDB04-07TX [1]
Wakulla [2 6] West Paces [2 6] X1 [1] YucTiz10 [1 1]
YucTiz11 [1 1] YucTiz8 [1 1] YucTiz9 [1 1] bm65 [1 1]
patient 19 [1] patient 89 [1 1] patient 97 [1 1] ys12 [1 1]
nat-host
Amblyomma lepidum [1] Canis lupus familiaris [36] Homo sapiens [9] yak [2]
specimen-voucher
SR_30Apr21_AA_V [1 1 1]
breed
German shepherd [2]

Disclaimer: The NCBI taxonomy database is not an authoritative source for nomenclature or classification - please consult the relevant scientific literature for the most reliable information.

Reference: How to cite this resource - Schoch CL, et al. NCBI Taxonomy: a comprehensive update on curation, resources and tools. Database (Oxford). 2020: baaa062. PubMed: 32761142 PMC: PMC7408187.


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