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Taxonomy browser (Trinickia symbiotica)

Trinickia symbiotica

Taxonomy ID: 863227 (for references in articles please use NCBI:txid863227)
current name
Trinickia symbiotica (Sheu et al. 2012) Estrada-de Los Santos et al. 2018 in [Estrada-de Los Santos P et al. (2018), Validation List No. 184 (2018)]
basionym:
Burkholderia symbiotica Sheu et al. 2012 in [Sheu SY et al. (2012)]
type strain of Burkholderia symbiotica: personal::JPY-345, BCCM/LMG:26032, BCRC:80258, KCTC:23309
homotypic synonym:
Paraburkholderia symbiotica (Sheu et al. 2012) Sawana et al. 2015 in [Sawana A et al. (2014)]
includes:
Burkholderia sp. JPY347
Burkholderia sp. NKMU-JPY345
Burkholderia sp. NKMU-JPY347
Burkholderia sp. NKMU-JPY366
Burkholderia sp. NKMU-JPY581
NCBI BLAST name: b-proteobacteria
Rank: species
Genetic code: Translation table 11 (Bacterial, Archaeal and Plant Plastid)
Lineage( full )
cellular organisms; Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Trinickia
   Entrez records   
Database name Direct links Links from type
Nucleotide 715 127
Protein 30,576 -
Genome 1 -
Popset 2 -
PubMed Central 13 -
SRA Experiments 2 -
Identical Protein Groups 14,993 -
BioProject 6 -
BioSample 4 1
Assembly 4 1
Taxonomy 1 -

Comments and References:
Estrada-de Los Santos P et al. (2018), doi: 10.3390/genes9080389, PubMed: abstract
Estrada-de Los Santos, P., Palmer, M., Chávez-Ramírez, B., Beukes, C., Steenkamp, E.T., Briscoe, L., Khan, N., Maluk, M., Lafos, M., Humm, E., Arrabit, M., Crook, M., Gross, E., Simon, M.F., Dos Reis Jr., F.B., Whitman, W.B., Shapiro, N., Poole, P.S., Hirsch, A.M., Venter, S.N., and James, E.K. "Whole genome analyses suggests that Burkholderia sensu lato contains two additional novel genera (Mycetohabitans gen. nov., and Trinickia gen. nov.): Implications for the evolution of diazotrophy and nodulation in the Burkholderiaceae." Genes (Basel) (2018) 9:E389.
Validation List No. 184 (2018), PubMed: abstract
Validation List No. 184: "List of new names and new combinations previously effectively, but not validly, published." Int. J. Syst. Evol. Microbiol. (2018) 68(11):3379-3393.
Sheu SY et al. (2012), PubMed: abstract
Sheu, S.-Y., Chou, J.-H., Bontemps, C., Elliott, G.N., Gross, E., James, E.K., Sprent, J.I., Young, J.P.W., and Chen, W.-M. "Burkholderia symbiotica sp. nov., isolated from root nodules of Mimosa spp. native to north-east Brazil." Int. J. Syst. Evol. Microbiol. (2012) 62(Pt 9):2272-2278.
Sawana A et al. (2014), doi: 10.3389/fgene.2014.00429, PubMed: abstract
Sawana, A., Adeolu, M., and Gupta, R.S. "Molecular signatures and phylogenomic analysis of the genus Burkholderia: proposal for division of this genus into the emended genus Burkholderia containing pathogenic organisms and a new genus Paraburkholderia gen. nov. harboring environmental species." Front. Genet. (2014) 5:429.
VALIDATION LIST No. 164 (2015) (Paraburkholderia symbiotica)
Validation List No. 164: "List of new names and new combinations previously effectively, but not validly, published." Int. J. Syst. Evol. Microbiol. (2015) 65:2017-2025.

External Information Resources (NCBI LinkOut)

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Trinickia symbiotica meta-databases BacDive
4 records from this provider organism-specific BioCyc
2 records from this provider organism-specific Genomes On Line Database
3 records from provider organism-specific Integrated Microbial Genomes
Notes:
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Information from sequence entries

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Disclaimer: The NCBI taxonomy database is not an authoritative source for nomenclature or classification - please consult the relevant scientific literature for the most reliable information.

Reference: How to cite this resource - Schoch CL, et al. NCBI Taxonomy: a comprehensive update on curation, resources and tools. Database (Oxford). 2020: baaa062. PubMed: 32761142 PMC: PMC7408187.


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