Taxonomy browser (Solanum habrochaites)

Entrez records
Database name	Direct links
Nucleotide	27,438
Protein	1,511
Structure	5
Genome	1
Popset	101
GEO Datasets	29
PubMed Central	466
Gene	128
SRA Experiments	271
Identical Protein Groups	575
BioProject	31
BioSample	263
Assembly	4
Taxonomy	1

Notes:

1) 'Nom. nov.' (= nomen novum, = replacement name, = avowed substitute) refers to a new name based on a legitimate or illegitimate, previously published name, which is its replaced synonym and which, when legitimate, does not provide the final species epithet, name, or stem of the replacement name.
2) A synonym that was replaced by a replacement name or nomen novum.
3) blocking name: Solanum hirsutum Dunal, 1813

Comments and References:

Lycopersicon

No valid combination exists in Solanum for this taxon.

Peralta, Knapp & Spooner (unpubl.)

Peralta, Knapp & Spooner, unpublished monograph, In: Solanaceae Genome Project Genomics Network, Cornell University - Solanum nomenclature.

Knapp S & Spooner DM 1999

Knapp S and DM Spooner. 1999. A new name for a common Ecuadorian and Peruvian wild tomato species. Novon 9: 375-376.

Genome Information

Go to NCBI genomic BLAST page for Solanum habrochaites

External Information Resources (NCBI LinkOut)

LinkOut	Subject	LinkOut Provider
dryaddb	supplemental materials	Dryad Digital Repository
Lycopersicon hirsutum Humb. & Bonpl.	taxonomy/phylogenetic	Encyclopedia of life
2 records from this provider	organism-specific	Genomes On Line Database
Lycopersicon hirsutum Humb. & Bonpl.	taxonomy/phylogenetic	Integrated Taxonomic Information System
Solanum habrochaites	taxonomy/phylogenetic	Lifemap
2 records from this provider	taxonomy/phylogenetic	Plants of the World Online
2 records from this provider	taxonomy/phylogenetic	The International Plant Names Index
Lycopersicon hirsutum Dunal	taxonomy/phylogenetic	USDA-ARS GRIN Taxonomy
search W3TROPICOS	taxonomy/phylogenetic	Vascular Tropicos
WebScipio: Solanum habrochaites	organism-specific	WebScipio - eukaryotic gene identification
diArk: Solanum habrochaites	organism-specific	diArk - a resource for eukaryotic genome research

Notes:: Groups interested in participating in the LinkOut program should visit the LinkOut home page.
A list of our current non-bibliographic LinkOut providers can be found here.

Information from sequence entries

Organism modifiers

To hide organism modifiers click here

strain
BJ-DC-10 [1]	CF4 [1]	LA1252 [1]	LA1777 [9 8 2603 3]
LS1321 [2 2]	LS502 [3 1]	NPGS (USDA-ARS) PI134418 [4 4]	accession LA1777 [2 1]
variety
LYC4 [1 1]
cultivar
Accession PI126449 [3 20904]	Cf4 [1 7]	EC-520061 [1 11]	EC520061 [3 3]
ECU0524_a [2 2 2]	ECU0524_b [2 2 2]	ECU0527_a [2 2 2]	ECU0527_b [2 2 2]
ECU0531_a [2 2 2]	ECU0531_b [2 2 2]	ECU0533_a [2 2 2]	ECU0533_b [2 2 2]
ECU0537_a [2 2 2]	ECU0537_b [2 2 2]	ECU0544_a [2 2 2]	ECU0544_b [2 2 2]
ECU0652_a [2 2 2]	ECU0652_b [2 2 2]	ECU1498_a [2 2 2]	ECU1498_b [2 2 2]
G1.1560 [1 1]	LA 1777 [6 2 2]	LA0407 [1 8 1 4 1]	LA1033 [1]
LA1223_a [2 2 2]	LA1223_b [2 2 2]	LA1253 [1 1 1]	LA1265 [1 1]
LA1347 [1 1]	LA1352 [1 1 1]	LA1353 [3 4 1 4]	LA1362 [1 1 1]
LA1718 [2 1 2]	LA1731 [3 2 3]	LA1737 [3 1 3]	LA1740 [6 1 5]
LA1753_a [2 2 2]	LA1753_b [2 2 2]	LA1772 [3 2 3]	LA1775(7219) [1 1 1]
LA1777 [14 62 21 40 28]	LA1978 [4 2 4]	LA2098 [4 2 4]	LA2098_a [2 2 2]
LA2098_b [2 2 2]	LA2106 [1 1 1]	LA2107 [1 1 1]	LA2144 [1 1 1]
LA2155 [3 3]	LA2156 [5 2 5]	LA2158 [13 1 7]	LA2167 [1 1 1]
LA2196 [3 2 3]	LA2204 [2 1 2]	LA2314_a [2 2 2]	LA2314_b [2 2 2]
LA2574 [1 1 1]	LA2650 [4 2 4]	LA2722 [3 2 3]	LA2860 [11 1 6]
LA2861 [5 2 5]	LA2861_a [2 2 2]	LA2861_b [2 2 2]	LA2975 [3 1 3]
LA3794 [1 1 1]	LA407 [1 4]	LA407(c1) [1 1 1]	La0386 [4]
PI 134417 [1 1]	PI 247087 [1 1]	PI126449 [2 2]	PI127826 [6 4]
PI129157(c1) [1 1 1]	PI134417(c1) [1 1 1]	PI134418(c1) [1 1 1]	PI251305(c1) [1 1 1]
T039_a [2 2 2]	T039_b [2 2 2]	ZY59 [1 1]
isolate
10492_1 [1 1 1]	10492_2_2 [1 1 1]	10496_1_2 [1 1 1]	10496_2_2 [1 1 1]
10504_1 [1 1 1]	10509_1 [1 1 1]	10510_3 [1 1 1]	10516_1 [1 1 1]
10516_2 [1 1 1]	19_CNRPROSEQ1 [1]	19_p3CNRBseq [1]	20_CNRPROSEQ1 [1]
361a [8 8 8]	361b [8 8 7]	362a [5 5 5]	362b [5 5 5]
363a [5 5 5]	363b [5 5 4]	364a [7 7 7]	364b [7 7 7]
365a [8 8 8]	365b [8 8 7]	366a [8 8 8]	366b [8 8 7]
367a [7 7 7]	367b [7 7 6]	371a [7 7 7]	371b [7 7 6]
372a [7 7 7]	372b [7 7 7]	373a [8 8 8]	373b [8 8 8]
374a [8 8 8]	374b [8 8 8]	375a [8 8 8]	375b [8 8 7]
376a [8 8 8]	376b [8 8 8]	377a [7 7 7]	377b [7 7 7]
381a [8 8 8]	381b [8 8 7]	382a [7 7 7]	382b [7 7 7]
383a [8 8 7]	383b [8 8 8]	384a [8 8 7]	384b [8 8 8]
385a [8 8 7]	385b [8 8 8]	386a [7 7 6]	386b [7 7 7]
391a [7 7 7]	391b [7 7 7]	392a [8 8 7]	392b [8 8 8]
393a [8 8 8]	393b [8 8 7]	394a [7 7 6]	394b [7 7 7]
395a [8 8 7]	395b [8 8 8]	396a [8 8 8]	396b [8 8 7]
4975 [1]	6_CNRPROSEQ1 [1]	7_CNRPROSEQ1 [1]	A [1]
CNR5-CDS_20 [1 1]	CNR5-CDS_6 [1 1]	CNR5-CDS_7 [1 1]	CNR5-CDS_87 [1 1]
CNRGENE_12 [1 1]	CNRGENE_35 [1 1]	CNRGENE_47 [1 1]	CNRGENE_55 [1 1]
CNRGENE_8 [1 1]	CNRMET_PRO_14 [1 1]	CNRMET_PRO_60 [1 1]	CNRMET_PRO_72 [1 1]
CNRMET_PRO_87 [1 1]	CPT1-LA1361 [1 1 1]	CPT1-LA1391 [1 1 1]	CPT1-LA1393 [1 1 1]
CPT1-LA1557A [1 1 1]	CPT1-LA1557B [1 1 1]	CPT1-LA1557C [1 1 1]	CPT1-LA1696 [1 1 1]
CPT1-LA1718 [1 1 1]	CPT1-LA1718-B [1 1 1]	CPT1-LA1731 [1 1 1]	CPT1-LA2098A [1 1 1]
CPT1-LA2098B [1 1 1]	CPT1-LA2104 [1 1 1]	CPT1-LA2106 [1 1 1]	CPT1-LA2109 [1 1 1]
CPT1-LA2155A [1 1 1]	CPT1-LA2155B [1 1 1]	CPT1-LA2167A [1 1 1]	CPT1-LA2167B [1 1 1]
CPT1-LA2196A [1 1 1]	CPT1-LA2196B [1 1 1]	CPT1-LA2196C [1 1 1]	CPT1-LA2409 [1 1 1]
CPT1-LA2650 [1 1 1]	CPT1-LA2864 [1 1 1]	ECU-1498 [1]	G1.1560 [2 2]
JA182 [1 1]	LA0094 [1 1]	LA0407 [5 3 1 3 15]	LA1225 [1 1]
LA1352 [1 1 1]	LA1353 [3 3]	LA1391 [1 1 1]	LA1393 [1 1 1]
LA1557 [1 1 1]	LA1625 [2 1 1]	LA1696 [3 1 4]	LA1718 [1 3 1 3 1]
LA1731 [1 1 1]	LA1775 [100 14 112]	LA1777 [23 42 42 33]	LA1778 [1 7]
LA1779 [3 1 3]	LA1918 [2]	LA1927 [3 1]	LA1928 [1 1]
LA2099 [3 1 3]	LA2100 [1 1 1]	LA2104 [2 1 3]	LA2106 [1 1 1]
LA2107 [1 1 1]	LA2155 [1 1 1]	LA2167 [2 1 2]	LA2196 [1 1 1]
LA2552 [2 1 2]	LA2812 [2 1 2]	LA2860 [1 1 1]	LA2976 [2 1 2]
LA3794 [1 1 1]	LA3863 [1 1]	LA3864 [1 1]	La0386 [1]
Lh1 [2]	Lh10 [1]	Lh11 [1]	Lh12 [1]
Lh13 [1]	Lh14 [1]	Lh15 [1]	Lh16 [1]
Lh17 [1]	Lh18 [1]	Lh19 [1]	Lh2 [1]
Lh20 [1]	Lh21 [1]	Lh22 [1]	Lh3 [1]
Lh4 [1]	Lh5 [1]	Lh6 [1]	Lh7 [1]
Lh8 [1]	Lh9 [1]	Lhg1 [1]	Lhg2 [1]
Lhg3 [1]	PI 134418 [2 1]	PI 390518 [1]	T0039 [2]
TGRC LA2196 [1 1]	TS-407 [2 166]	ZS13 [1 1]	ZS2 [1 1 1]
ZS3 [1 1 1]	ZS8 [1 1 1]
specimen-voucher
CNPH420 (CNPH,EMBRAPA Brasil) [1]	LA0094 [3 3]	LA1223 [2 1]	LA1353 [1 1]
LA1691 [1]	LA1721 [1 1]	LA1753 [1 1]	LA1777 [4 1 4]
LA1927 [1 1]	LA1928 [1 1]	LA2098 [1 1 1]	LA2099 [1 1 1]
LA2101 [1 1]	LA2101 (TGRC, UCDavis, USA) [3]	LA2119 [1 1 1]	LA2144 [2 1 2]
LA2175 [1 1 1]	LA2175A [1 1 1]	LA2722 [1 1]	LA2863-402 [1 1 1]
LA2868 [1 1 1]	Marshall, J. s. n. LA1353 (Kew Gardens UK) [1]	PI 126445 [50 11]	PI126449 [2 1]
PTIS:PI LA1353 [20 18 18]	TGRC_1353 [1]	TGRC_1779 [2]	TGRC_1918 [1]
TGRC_2098 [1]	TGRC_LA1353 [3 3]	TGRC_LA1777 [3 3]	TGRC_LA1779 [1 1]
TGRC_LA1918 [3 3]	TGRC_LA2098 [3 3]	VIR13964 [3 3 3]	VIR3969 [1 4 1]
forma
glabratum [11 4]
ecotype
LA2167 [1 1]
bio-material
TGRC:LA1777 [2 2]	USDA:GRIN:PI126445 [3 3]	USDA:GRIN:PI126446 [2 2]	USDA:GRIN:PI127826 [2 2]
USDA:GRIN:PI128644 [4 4]	USDA:GRIN:PI209978 [6 6]	USDA:GRIN:PI247087 [4 4]	USDA:GRIN:PI251303 [4 4]
USDA:GRIN:PI251304 [2 2]	USDA:GRIN:PI308182 [4 4]	USDA:GRIN:PI365903 [2 2]	USDA:GRIN:PI365904 [4 4]
USDA:GRIN:PI365905 [2 2]	USDA:GRIN:PI365906 [2 2]	USDA:GRIN:PI365907 [2 2]	USDA:GRIN:PI379056 [2 2]
USDA:GRIN:PI390515 [4 4]	USDA:GRIN:PI390516 [2 2]	USDA:GRIN:PI390517 [2 2]	USDA:GRIN:PI390518 [2 2]
USDA:GRIN:PI390658 [2 2]	USDA:GRIN:PI390659 [2 2]	USDA:GRIN:PI390661 [2 2]	USDA:GRIN:PI390662 [2 2]
USDA:GRIN:PI390663 [4 4]	WIR 2970 [2 2 2]

Disclaimer: The NCBI taxonomy database is not an authoritative source for nomenclature or classification - please consult the relevant scientific literature for the most reliable information.

Reference: How to cite this resource - Schoch CL, et al. NCBI Taxonomy: a comprehensive update on curation, resources and tools. Database (Oxford). 2020: baaa062. PubMed: 32761142 PMC: PMC7408187.

Comments and questions to info@ncbi.nlm.nih.gov

[Help]

[Search]

[NLM NIH]

[Disclaimer]