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Taxonomy browser (Lentinula edodes)

Lentinula edodes

Taxonomy ID: 5353 (for references in articles please use NCBI:txid5353)
current name
Lentinula edodes (Berk.) Pegler, 1976
Agaricus edodes Berk., 1877
holotype of Agaricus edodes: K(M):121996
homotypic synonym:
Lentinus edodes
Genbank common name: shiitake mushroom
NCBI BLAST name: basidiomycete fungi
Rank: species
Genetic code: Translation table 1 (Standard)
Mitochondrial genetic code: Translation table 4 (Mold Mitochondrial; Protozoan Mitochondrial; Coelenterate Mitochondrial; Mycoplasma; Spiroplasma)
Lineage( full )
cellular organisms; Eukaryota; Opisthokonta; Fungi; Dikarya; Basidiomycota; Agaricomycotina; Agaricomycetes; Agaricomycetidae; Agaricales; Marasmiineae; Omphalotaceae; Lentinula
   Entrez records   
Database name Subtree links Direct links
Nucleotide 52,451 51,617
Protein 119,770 119,770
Structure 12 12
Genome 1 1
Popset 59 59
GEO Datasets 17 17
PubMed Central 2,573 2,573
Gene 14,442 14,442
SRA Experiments 1,311 1,311
Identical Protein Groups 92,666 92,666
BioProject 350 345
BioSample 1,088 1,086
Assembly 18 16
Taxonomy 4 1

Comments and References:

image:Lentinula edodes

Genome Information

Go to NCBI genomic BLAST page for Lentinula edodes

External Information Resources (NCBI LinkOut)

LinkOut Subject LinkOut Provider
dryaddb supplemental materials Dryad Digital Repository
Lentinula edodes (Berk.) Pegler 1976 taxonomy/phylogenetic Encyclopedia of life
5 records from this provider organism-specific Genomes On Line Database
Show Biotic Interactions taxonomy/phylogenetic Global Biotic Interactions
2 records from this provider culture/stock collections Global Catalogue of Microorganisms
2 records from this provider taxonomy/phylogenetic Index Fungorum
2 records from this provider taxonomy/phylogenetic MycoBank
2 records from this provider taxonomy/phylogenetic Systematic Mycology and Microbiology Laboratory, Fungal Databases
Lentinula edodes taxonomy/phylogenetic TreeBase
2 records from this provider organism-specific WebScipio - eukaryotic gene identification
5 records from this provider organism-specific diArk - a resource for eukaryotic genome research
Wikipedia taxonomy/phylogenetic iPhylo
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A list of our current non-bibliographic LinkOut providers can be found here.

Information from sequence entries

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Disclaimer: The NCBI taxonomy database is not an authoritative source for nomenclature or classification - please consult the relevant scientific literature for the most reliable information.

Reference: How to cite this resource - Schoch CL, et al. NCBI Taxonomy: a comprehensive update on curation, resources and tools. Database (Oxford). 2020: baaa062. PubMed: 32761142 PMC: PMC7408187.

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