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Taxonomy browser (Nicotiana attenuata)

Nicotiana attenuata

Taxonomy ID: 49451 (for references in articles please use NCBI:txid49451)
current name
Nicotiana attenuata Torr. ex S.Watson, 1871
NCBI BLAST name: eudicots
Rank: species
Genetic code: Translation table 1 (Standard)
Mitochondrial genetic code: Translation table 1 (Standard)
Plastid genetic code: Translation table 11 (Bacterial, Archaeal and Plant Plastid)
Lineage( full )
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliopsida; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
   Entrez records   
Database name Direct links
Nucleotide 185,262
Protein 78,689
Genome 1
Popset 6
GEO Datasets 501
PubMed Central 1,292
Gene 40,175
SRA Experiments 1,789
Identical Protein Groups 52,646
BioProject 51
BioSample 1,564
Assembly 3
Taxonomy 1

Comments and References:

image:Nicotiana attenuata
GRIN (Oct 21, 2009)
Name verified on 21 October 2009 in: USDA, ARS, National Genetic Resources Program. Germplasm Resources Information Network - (GRIN) [Online Database]. National Germplasm Resources Laboratory, Beltsville, Maryland.

Genome Information

Go to NCBI genomic BLAST page for Nicotiana attenuata

External Information Resources (NCBI LinkOut)

LinkOut Subject LinkOut Provider
Nicotiana attenuata taxonomy taxonomy/phylogenetic Arctos Specimen Database
Nicotiana attenuata taxonomy/phylogenetic CalPhotos
dryaddb supplemental materials Dryad Digital Repository
Nicotiana attenuata Torr. ex S. Wats. taxonomy/phylogenetic Encyclopedia of life
2 records from this provider organism-specific Genomes On Line Database
Show Biotic Interactions taxonomy/phylogenetic Global Biotic Interactions
Nicotiana attenuata Torr. ex S. Wats. taxonomy/phylogenetic Integrated Taxonomic Information System
OMA taxonomy/phylogenetic OMA Browser: Orthologous MAtrix
Nicotiana attenuata taxonomy/phylogenetic PLANTS Database (USDA/NRCS)
Nicotiana attenuata (Torr. ex S.Watson) herbarium/museum collections PlantaeDB, University of Bucharest
Nicotiana attenuata taxonomy/phylogenetic Plants of the World Online
Nicotiana attenuata taxonomy/phylogenetic The International Plant Names Index
Nicotiana attenuata Torr. ex S. Watson taxonomy/phylogenetic USDA-ARS GRIN Taxonomy
search W3TROPICOS taxonomy/phylogenetic Vascular Tropicos
WebScipio: Nicotiana attenuata organism-specific WebScipio - eukaryotic gene identification
2 records from provider organism-specific diArk - a resource for eukaryotic genome research
Notes:
Groups interested in participating in the LinkOut program should visit the LinkOut home page.
A list of our current non-bibliographic LinkOut providers can be found here.

Information from sequence entries

Organism modifiers

To hide organism modifiers click here
strain
Inbred Line Utah DI92 [1 28] UT [2 1 93641 77592 53]
cultivar
Arizona 22x inbred [2 3 1] Utah inbred line DI92 [1 1]
isolate
133 [1 1 1] 138 [1 1 1] 149 [1 1 1] 176 [1 1 1]
179 [1 1 1] 194 [1 1 1] 214 [1 1 1] 224 [1 1 1]
22645 [2 2] 278 [1 1 1] 304 [1 1 1] 305 [1 1 1]
308 [1 1 1] 331 [1 1 1] 341 [1 1 1] 351 [1 1 1]
382 [1 1 1] 384 [1 1 1] 421 [1 1 1] 422 [1 1 1]
43 [1 1 1] 84 [1 1 1] 85 [1 1 1] 97 [1 1 1]
APR 1047 [1 1] APR 5452 [1 1] Arizona [2 1 2] CGS 542 [1 1]
MS 90 [1 1] MTK 3797 [1 1] MTN 3411 [1 1] Na555476-N' [1]
OAS-TL 1656 [1 1] OAS-TL 694 [1 1] R009 [1 1 1] SAMS 113 [1 1]
SAMS 140 [1 1] SIR 682 [1 1] SULTR 1321 [1 1] UT31x [1 3 13 193]
Univ. of Birmingham, Solanaceae seed collection, # BIRM S.1001 [1 2] Utah [1 1 1]
specimen-voucher
CCDB-24913-E11 [1 1] CCDB-24913-F11 [2 1] CCDB-24913-G11 [2 1] Helgason and Monro 621 (BM) [1]
Nijmegen Botanical Garden 92475008 [1 1]
authority
Nicotiana attenuata Torr. [1 1]
ecotype
Arizona [3 1 6] Utah [121 4 10 10 108]
breed
30x inbred [2 1 37 35]
bio-material
Kew DNA bank 12610 [1 1 1] PI555476 [1]


Disclaimer: The NCBI taxonomy database is not an authoritative source for nomenclature or classification - please consult the relevant scientific literature for the most reliable information.

Reference: How to cite this resource - Schoch CL, et al. NCBI Taxonomy: a comprehensive update on curation, resources and tools. Database (Oxford). 2020: baaa062. PubMed: 32761142 PMC: PMC7408187.


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