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Taxonomy browser (Manihot esculenta)

Manihot esculenta

Taxonomy ID: 3983 (for references in articles please use NCBI:txid3983)
current name
Manihot esculenta Crantz
Genbank common name: cassava
NCBI BLAST name: eudicots
Rank: species
Genetic code: Translation table 1 (Standard)
Mitochondrial genetic code: Translation table 1 (Standard)
Plastid genetic code: Translation table 11 (Bacterial, Archaeal and Plant Plastid)
Other names:
heterotypic synonym
Manihot utilissima
common name(s) manioc, tapioca, yuca
Lineage( full )
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliopsida; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Manihoteae; Manihot
   Entrez records   
Database name Subtree links Direct links
Nucleotide 316,945 280,053
Protein 111,490 111,465
Structure 10 10
Genome 1 1
Popset 324 324
GEO Datasets 364 354
PubMed Central 2,767 2,767
Gene 36,125 36,125
SRA Experiments 7,506 7,415
Protein Clusters 75 75
Identical Protein Groups 58,327 58,312
BioProject 123 118
BioSample 25,652 25,599
Assembly 9 8
Taxonomy 4 1

Comments and References:

IPNI (Mar 07, 2008)
Name verified on 7 March 2008, in: The International Plant Names Index (2004). Published on the Internet http://www.ipni.org
GRIN (Mar 07, 2008)
Name verified on 7 March 2008 in: USDA, ARS, National Genetic Resources Program. Germplasm Resources Information Network - (GRIN) [Online Database]. National Germplasm Resources Laboratory, Beltsville, Maryland.
TROPICOS (Mar 07, 2008)
Name verified on 7 March 2008, in: W3TROPICOS, the Missouri Botanical Garden's VAST (VAScular Tropicos) nomenclatural database, vers. 1.5, Missouri Botanical Garden, St. Louis, MO, 63166-0299, USA.
Roa et al. 1999
Roa AC et al. 1997. AFLP analysis of relationships among cassava and other Manihot species. Theoretical and applied genetics 95: 741-750.
FNA - Manihot
Hayden WJ. 2016. Manihot Miller, Gard. Dict. Abr. ed. 4. vol. 2. 1754. In Flora of North America Editorial Committee (Eds.) Flora of North America North of Mexico, Volume 12: Magnoliophyta: Vitaceae to Garryaceae. New York and Oxford. On-line version.

Genome Information

Go to NCBI genomic BLAST page for Manihot esculenta
Genome view: 19 chromosomes
Names LG1 LG2 LG3 LG4 LG5 LG6 LG7 LG8 LG9 LG10 LG11 LG12 LG13 LG14 LG15 LG16 LG17 LG18 Pltd

External Information Resources (NCBI LinkOut)

LinkOut Subject LinkOut Provider
Manihot esculenta taxonomy taxonomy/phylogenetic Arctos Specimen Database
Manihot esculenta Crantz taxonomy/phylogenetic Encyclopedia of life
4 records from this provider organism-specific Genomes On Line Database
Show Biotic Interactions taxonomy/phylogenetic Global Biotic Interactions
2614208507: Manihot esculenta CV AM560-2 organism-specific Integrated Microbial Genomes
Manihot esculenta Crantz taxonomy/phylogenetic Integrated Taxonomic Information System
OMA taxonomy/phylogenetic OMA Browser: Orthologous MAtrix
Manihot esculenta taxonomy/phylogenetic PLANTS Database (USDA/NRCS)
2 records from this provider taxonomy/phylogenetic Plants of the World Online
2 records from this provider taxonomy/phylogenetic The International Plant Names Index
2 records from this provider taxonomy/phylogenetic USDA-ARS GRIN Taxonomy
search W3TROPICOS taxonomy/phylogenetic Vascular Tropicos
WebScipio: Manihot esculenta organism-specific WebScipio - eukaryotic gene identification
2 records from this provider organism-specific diArk - a resource for eukaryotic genome research
Wikipedia taxonomy/phylogenetic iPhylo
Notes:
Groups interested in participating in the LinkOut program should visit the LinkOut home page.
A list of our current non-bibliographic LinkOut providers can be found here.

Information from sequence entries

Show organism modifiers



Disclaimer: The NCBI taxonomy database is not an authoritative source for nomenclature or classification - please consult the relevant scientific literature for the most reliable information.

Reference: How to cite this resource - Schoch CL, et al. NCBI Taxonomy: a comprehensive update on curation, resources and tools. Database (Oxford). 2020: baaa062. PubMed: 32761142 PMC: PMC7408187.


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