Taxonomy browser (Alloyangia pacifica)

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Taxonomy browser (Alloyangia pacifica)

Alloyangia pacifica

Taxonomy ID: 311180 (for references in articles please use NCBI:txid311180)

current name

Alloyangia pacifica (Dai et al. 2006) Deshmukh and Oren 2023 in [Deshmukh UB & Oren A (2023e)]

basionym:

Yangia pacifica Dai et al. 2006, nom. illeg.¹⁾ in [Dai X et al. (2006)]

type strain of Yangia pacifica: personal::DX5-10, CGMCC :1.3455, JCM :12573, DSM :26894

homotypic synonym:

Yangia pacifica Dai et al. 2006 emend. Verma et al. 2021, nom. illeg., emended name^1),2) in [Verma A et al. (2021)]

homotypic synonym:

Salipiger pacificus (Dai et al. 2006) Hördt et al. 2020 in [Validation List No. 194 (2020), Hördt A et al. (2020)]

includes:

alpha proteobacterium DX5-10

NCBI BLAST name: a-proteobacteria
Rank: species
Genetic code: Translation table 11 (Bacterial, Archaeal and Plant Plastid)

Lineage( full ): cellular organisms; Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodobacterales; Roseobacteraceae; Alloyangia

Entrez records
Database name	Direct links	Links from type
Nucleotide	334	184
Protein	34,892	-
Genome	1	-
Popset	6	-
PubMed Central	10	-
SRA Experiments	2	-
Identical Protein Groups	27,522	-
BioProject	7	-
BioSample	7	2
Assembly	7	2
Taxonomy	1	-

Notes:

1) 'Nom. illeg.' (= nomen illegitimum, = illegitimate name) refers to a validly published name that is not in accordance with the particular rules of its relevant Code of Nomenclature.
2) emend. (emendavit): Used when the alteration of the diagnostic characters or of the circumscription of a taxon modifies the nature of the taxon.

Comments and References:

Deshmukh UB & Oren A (2023e), PubMed: abstract

Deshmukh, U.B., and Oren, A. "Proposal of Thalassovita gen. nov. and Alloyangia gen. nov. as replacement names for the illegitimate prokaryotic generic names Thalassobius and Yangia, respectively." Int. J. Syst. Evol. Microbiol. (2023) 73(9):006025.

Dai X et al. (2006), PubMed: abstract

Dai, X., Wang, B.-J., Yang, Q.-X., Jiao, N.-Z., and Liu, S.-J. "Yangia pacifica gen. nov., sp. nov., a novel member of the Roseobacter clade from coastal sediment of the East China Sea." Int. J. Syst. Evol. Microbiol. (2006) 56(Pt 3):529-533.

Verma A et al. (2021), PubMed: abstract

Verma, A., Sundharam, S.S., Pal, Y., Bisht, B., Yadav, P., and Krishnamurthi, S. "Yangia mangrovi sp. nov., a novel member of the Roseobacter clade isolated from mangrove soil and emended description of Yangia pacifica Dai et al. 2006." Int. J. Syst. Evol. Microbiol. (2021) 71(9):005021.

Validation List No. 194 (2020), PubMed: abstract

Validation List No. 194: "List of new names and new combinations previously effectively, but not validly, published." Int. J. Syst. Evol. Microbiol. (2020) 70(7):4043-4049.

Hördt A et al. (2020), doi: 10.3389/fmicb.2020.00468, PubMed: abstract

Hördt, A., López, M.G., Meier-Kolthoff, J.P., Schleuning, M., Weinhold, L.-M., Tindall, B.J., Gronow, S., Kyrpides, N.C., Woyke, T., and Göker, M. "Analysis of 1,000+ type-strain genomes substantially improves taxonomic classification of Alphaproteobacteria." Front. Microbiol. (2020) 11:468.

External Information Resources (NCBI LinkOut)

LinkOut	Subject	LinkOut Provider
Salipiger pacificus	meta-databases	BacDive
6 records from this provider	organism-specific	BioCyc
Yangia pacifica Dai et al. 2006	taxonomy/phylogenetic	Encyclopedia of life
2 records from this provider	organism-specific	Genomes On Line Database
Yangia pacifica	culture/stock collections	Global Catalogue of Microorganisms
5 records from this provider	organism-specific	Integrated Microbial Genomes
Yangia pacifica Dai, Wang, Yang, Jiao & Liu, 2006	taxonomy/phylogenetic	Ocean Biogeographic Information System
Yangia pacifica Dai, Wang, Yang, Jiao & Liu, 2006	taxonomy/phylogenetic	World Register of Marine Species

Notes:: Groups interested in participating in the LinkOut program should visit the LinkOut home page.
A list of our current non-bibliographic LinkOut providers can be found here.

Information from sequence entries

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Disclaimer: The NCBI taxonomy database is not an authoritative source for nomenclature or classification - please consult the relevant scientific literature for the most reliable information.

Reference: How to cite this resource - Schoch CL, et al. NCBI Taxonomy: a comprehensive update on curation, resources and tools. Database (Oxford). 2020: baaa062. PubMed: 32761142 PMC: PMC7408187.

Comments and questions to info@ncbi.nlm.nih.gov

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