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Taxonomy browser (Rhizobium etli)

Rhizobium etli

Taxonomy ID: 29449 (for references in articles please use NCBI:txid29449)
current name
Rhizobium etli Segovia et al. 1993
type strain of Rhizobium etli: CFN:42, ATCC:51251, CIP:104814, DSM:11541, HAMBI:1727, IFO:15573, NBRC:15573, JCM:21823, BCCM/LMG:17827
includes:
Rhizobium sp. Egypt 11
Rhizobium sp. NGB-FR-101
NCBI BLAST name: a-proteobacteria
Rank: species
Genetic code: Translation table 11 (Bacterial, Archaeal and Plant Plastid)
Lineage( full )
cellular organisms; Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium
   Entrez records   
Database name Subtree links Direct links Links from type
Nucleotide 10,408 1,425 61
Protein 79,534 31,649 -
Structure 66 10 -
Genome 1 1 -
Popset 106 104 -
GEO Datasets 70 19 -
PubMed Central 1,412 1,412 -
Gene 39,141 13,060 -
SRA Experiments 26 25 -
Protein Clusters 4,634 4,634 -
Identical Protein Groups 54,868 27,983 -
BioProject 38 16 -
BioSample 39 28 2
Assembly 20 9 -
PubChem BioAssay 1 - -
Taxonomy 12 1 -

Comments and References:

Diouf A et al. (2000)
Diouf, A., de Lajudie, P., Neyra, M., Kersters, K., Gillis, .M, Martinez-Romero, E., and Gueye, M. "Polyphasic characterization of rhizobia that nodulate Phaseolus vulgaris in West Africa (Senegal and Gambia)." Int. J. Syst. Evol. Microbiol. (2000) 50:159-170.
Segovia L et al. (1993)
Segovia, L., Young, J.P., and Martinez-Romero, E. "Reclassification of American Rhizobium leguminosarum biovar phaseoli type I strains as Rhizobium etli sp. nov." Int. J. Syst. Bacteriol. (1993) 43:374-377.
Wang ET et al. (1999b)
Wang, E.T., Rogel, M.A., Garcia-de los Santos, A., Martinez-Romero, J., Cevallos, M.A., and Martinez-Romero, E. "Rhizobium etli bv. mimosae, a novel biovar isolated from Mimosa affinis." Int. J. Syst. Bacteriol. (1999) 49:1479-1491.

External Information Resources (NCBI LinkOut)

LinkOut Subject LinkOut Provider
Rhizobium etli meta-databases BacDive
Rhizobium etli Segovia et al. 1993 taxonomy/phylogenetic Encyclopedia of life
3 records from this provider organism-specific Genomes On Line Database
Show Biotic Interactions taxonomy/phylogenetic Global Biotic Interactions
Rhizobium etli culture/stock collections Global Catalogue of Microorganisms
11 records from this provider organism-specific Integrated Microbial Genomes
OMA taxonomy/phylogenetic OMA Browser: Orthologous MAtrix
Notes:
Groups interested in participating in the LinkOut program should visit the LinkOut home page.
A list of our current non-bibliographic LinkOut providers can be found here.

Information from sequence entries

Organism modifiers

To hide organism modifiers click here
strain
1002 [2 1 1] 100v [1] 1010 [161 4] 1014 [1 1 1]
1017 [1] 1024 [2] 10p [2 1] 11-2 [1]
11m [1] 131p [1] 1386p [1 1] 139p [1]
1410p [2 2 1] 1447p [2 2 1] 1449p [1 1] 1464p [1 1]
1470p [1 1] 1473p [1 1] 1494p [1 1] 1499p [1 1]
149p [1] 14_2 [1] 1515p [1 1] 1530p [1 1]
1545p [1 1] 1557p [1 1] 1579v [1] 1654v [1]
169m [2 1 1] 1708m [1] 18p [1] 198p [2 1 1]
1p [1] 205p [1] 210p [1] 21B [1 1 1]
21p [2 1] 222p [1] 230p [1] 236p [1]
285 [1 1 1] 28C [1 1 1] 292 [1 1 1] 29B [1 1 1]
300p [1] 310p [1] 31C [1 1 1] 327 [1 1 1]
35B [1 1 1] 391p [1] 394p [2 1 1] 482p [2 1 1]
499p [1] 503p [1] 508p [2 1 1] 549p [1]
563p [2 1 1] 570p [1] 584p [1] 60p [1]
60v [1] 615p [2 1 1] 616p [2 1 1] 639p [1]
665p [1] 712p [1] 74m [2 1 1] 751p [1]
807p [2 1 1] 820p [1] 858p [2 1 1] 864p [1]
86p [1] 872p [1] 886 [1] 8C-3 strain 8C-3 [2 2 2737 7051] of Rhizobium etli 8C-3
8_3 [1] 8_5 [1] 913 [1] 930 [1 1 1]
935 [2] 950 [1] 975 [2 1 1] 986 [1 1 1]
ACO1C1_3 [1 1 1] ACO4C1_26 [1 1 1] ACOA2_3 [2 2 2] ACOA2_5 [1 1 1]
ACOA4_11 [1 1 1] ACOA4_12 [1 1 1] ACOA4_3 [1 1 1] ACOA4_5 [1 1 1]
ACOA4_6 [1 1 1] ACOA4_8 [1 1 1] ACOA4_9 [1 1 1] ACOB1_2 [2 2 2]
ACOB1_20 [1 1 1] ACOB1_3 [1 1 1] ACOB1_8 [1 1 1] ACOB2_10 [1 1 1]
ACOB2_22 [1 1 1] ACOB3_11 [1 1 1] ACOB3_14 [1 1 1] ACOB3_15 [1 1 1]
ACOB3_3 [1 1 1] ACOB3_4 [1 1 1] ACOB3_6 [1 1 1] ACOB4_36 [1 1 1]
ACOB4_50 [1 1 1] AFA1C1_6 [1 1 1] AFA2C1_2f [1 1 1] AFA2C1_4f [1 1 1]
AFA2C1_5f [1 1 1] AFAB1_1 [1 1 1] AFAB1_10 [1 1 1] AFAB1_16 [1 1 1]
AFAB1_17 [1 1 1] AFAB1_20 [1 1 1] AFAB1_21 [1 1 1] AFAB1_24 [1 1 1]
AFAB1_26 [1 1 1] AFAB1_7 [1 1 1] AFAB2_1 [1 1 1] AFAB2_10 [2 2 2]
AFAB2_12 [1 1 1] AFAB2_9 [2 2 2] AFAB3_13f [1 1 1] AFAB3_15f [1 1 1]
AFAB3_8f [1 1 1] AFAB3_9f [1 1 1] ALF4 [1] APEX_Re-1 [1]
AR10 [1] AR11 [1] AR25 [1] ASO1C [1]
ASO4B [1] ASU4 [1] ATCC 51251 [1 1] B1 [4 8 3]
BD2-Sg [1 1] BRA 5 [1 6] BR_282 [3 3 3] BR_285 [3 3 3]
BR_370 [3 3 3] BSPS10 [1 1] Brasil 5 strain Brasil 5 [6 6318] of Rhizobium phaseoli Brasil 5 Brasil5 [1 1]
CCBAU 05689 [4 4 3] CCBAU 15521 [3 3 2] CCBAU 65708 [6 5 5] CCBAU 65830 [5 4 4]
CCBAU 83475 [4 3] CCBAU 85027 [2] CCBAU 85039 [3 3 2] CCBAU 85157 [1]
CE 3 [8 19] CE-3 [8 19] CE2 [1 4] CE3 [12 14 4 36 97 12]
CE3H7 [1 2] CFN 42 [1 54 10 6029] CFN 42 (type strain) strain CFN 42 (type strain) [1] of Rhizobium etli CFN 42 CFN 42, (USDA 9032) strain CFN 42, (USDA 9032) [1] of Rhizobium etli CFN 42
CFN 42; USDA 9032 strain CFN 42; USDA 9032 [1] of Rhizobium etli CFN 42 CFN-42 strain CFN 42 [1 35 1 6019] of Rhizobium etli CFN 42 CFN234 [1 1 1] CFN42 strain CFN 42 [1 35 1 6019] of Rhizobium etli CFN 42
CIAT 151 [9 1] CIAT 652 strain CIAT 652 [1 2 2 12 6057] of Rhizobium etli CIAT 652 CIAT151 strain CIAT 151 [9 1] CMDB-12 [1]
CNPAF 512 [6] CNPAF512 [1 1 412 6582] CNPSO661 strain CNPSo 661 [8 6 7] of Rhizobium esperanzae CNPSO664 [6 6 5]
CNPSO666 strain CNPSo 666 [8 6 7] of Rhizobium esperanzae CNPSO679 [6 6 5] CNPSo 661 strain CNPSo 661 [8 6 7] of Rhizobium esperanzae CNPSo 666 strain CNPSo 666 [8 6 7] of Rhizobium esperanzae
CPAO 11.5F [1] CPAO 26.6F [1] Ch24-10 [1 1 1] ECRI 11A [1 1]
ECRI 15 [1 1] ECRI 21A [1 1] ECRI 21B [3 3 3] ECRI 23C [1 1]
ECRI 29B [3 3 3] ECRI 31C [2 2 1] ECRI 31D [2 2 2] ECRI 35A [1 1]
ECRI 36 [1 1] ECRI 4A [1 1] ECRI 8 [1 1] EFBRI 32 [1]
Egypt 11 [1 1] G1 [6 5 4] G2 [4 4 3] GCKB6 [1]
GM03 [1 1] GR 56 strain GR56 [2 1 2316] of Rhizobium etli GR56 GR56 [2 1 2324 6 7] Gsoil 3034-1 [1 1]
H1 [1 8 1 8] H12 [8 6 8] H14 [8 8] H15 [8 8]
H2 [8 1 8] H20 [8 6 8] H3 [8 1 8] H4 [8 1 8]
H6 [8 8] H7 [11 10] H8 [8 8] H9 [8 8]
HBR14 [6 6 5] HBR19 [6 6 5] HBR2 [6 6 5] HBR24 [6 6 5]
HBR4 [6 6 5] HBR5 [6 6 5] HBR51 [6 6 5] I1 [1]
I24 [1] IE 954 [6] IGFRI_R241 [1 1] II-RhW11 [1 1]
II-RhW9 [1] IIRhw14 [1] IIRhw6 [1 1] IPR-Pv589 [1]
ISP19 [1 1] ISP23 [1 1] ISP34 [1 1] ISP40 [1 1]
ISP42 [2 2] Ind [1] JLI2 [1] JSO2A [1]
JSO9C [1] KB13 [1 1] KIM5 strain Kim5 [1 18 6522] of Rhizobium sp. Kim5 KIM5S [7 6 8]
KJ2 [1 1] KM2 [1 1] Kim 5 strain Kim5 [1 18 6522] of Rhizobium sp. Kim5 L1 [5 4 4]
L101 [11 10] L29 [8 8] L46 [6 5] L7 [11 10]
L82 [8 8] L88 [8 8] L9 [6 5] LBMP-12BR [1]
LMG 17827 [2 1] M1 [6 5] M10 [8 8] M11 [8 8]
M17 [8 8] M4 [8 8] MSSRF_2A30 [1 1] MSSRF_2A30A [1 1]
MSSRF_2A59 [1 1] Mim 7-4 [2 1] Mim-1 [1] Mim-2 [1]
Mim1 [1 1 7590 22 6799] Mim2 [9 5 8] Mim7-4 [4 4] N1 [3 2 2]
N1.14_ST20 [2 2 2] N20 [1 1] N3.16_ST41 [2 2 2] N3.3_ST25 [2 2 2]
N42 [1] NBRC 15573 [1 2] NC1 [5 5] NC10 [8 8]
NC26 [8 8] NC3 [5 5] NC34 [8 8] NC35 [8 8]
NC5 [8 8] NC6 [8 8] NC8 [8 8] NCX 33 [1 1]
NDB2_2 [2 2 2] NGB-CR117 [6 5] NGB-CR123 [6 5] NGB-CR124 [6 5]
NGB-CR129 [6 5] NGB-CR136 [6 5] NGB-FR-101 [5 4] NGB-NS9 [1]
NOKO-301 [1] NOKO-312 [1] NOKO-313 [1] NOT2C1_2 [1 1 1]
NOT2C2_10 [2 2 2] NSB2_1 [1 1 1] NXA12_19 [1 1 1] NXA12_2 [1 1 1]
NXA5_3 [1 1 1] NXA6_1 [1 1 1] NXB3_1 [1 1 1] NXB5_4 [1 1 1]
NXB5_E2 [2 2 2] NXC12 [1 12 6393] Nitragin [1] Nitragin 8251 [1]
P14N1 [1] P18 [1] P37N1 [1] P90N5 [1]
PRF1 [1 1] PRF116 [1 1] PRF126 [1 1] PRF127 [1 1]
PRF133 [1 1] PRF150 [1 1] PRF154 [1 1] PRF160 [1 1]
PRF164 [1 1] PRF173 [1 1] PRF178 [1 1] PRF190 [1 1]
PRF206 [1 1] PRF227 [1 1] PRF228 [1 1] PRF229 [1 1]
PRF230 [1 1] PRF238 [1 1] PRF244 [1 1] PRF246 [1 1]
PRF29 [1 1] PRF30 [1 1] PRF31 [1 1] PRF35B [1 1]
PRF39 [1 1] PRF42 [1 1] PRF49 [1 1] PRF51 [1 1]
PRF68 [1 1] PRF69 [1 1] PRF7 [1 1] PRF72 [1 1]
PRF74 [1 1] PRF76 [1 1] PRF79 [1 1] PRF82 [1 1]
PRF96 [1 1] PantRK8 [1] Q2-23 [1] R19 [1]
R2 [1] R22G [1 1 1] R6 [1] RACOB51f [1 1 1]
RACOB53f [1 1 1] RACOB55f [1 1 1] RACOB_15 [1 1 1] RACOB_3 [1 1 1]
RACOB_5 [1 1 1] RAFAB_12 [1 1 1] RAFAB_18 [1 1 1] RAFAB_20 [1 1 1]
RAFAB_21 [1 1 1] RAFAB_5 [1 1 1] RAFAB_6 [1 1 1] RAFAB_7 [1 1 1]
RAFAGC_1f [1 1 1] RAFAGC_8n [1 1 1] RAFAMC_5f [1 1 1] RAFANC_4 [1 1 1]
RBHR-15 [1] RCA3_1 [1 1 1] RCA3_2 [1 1 1] RDA1_6 [1 1 1]
RDA1_7b [1 1 1] RDA2_7 [1 1 1] RDB1_4 [2 2 2] RDB2_1 [1 1 1]
RDB2_4 [1 1 1] RNDA11 [1 1 1] RNDA12 [1 1 1] RNDA4 [1 1 1]
RNDA5 [1 1 1] RNDA8 [1 1 1] RNDA9 [1 1 1] RNDB6 [1 1 1]
RNDB7 [1 1 1] RNDB9 [1 1 1] RNOTB12 [1 1 1] RNSA1 [1 1 1]
RNSA8 [1 1 1] RNSA9 [1 1 1] RNSB11 [1 1 1] ROT2C1_2 [1 1 1]
ROT2C1_7 [1 1 1] ROT2C2_6 [1 1 1] ROTA2_11n [2 2 2] ROTA4_4 [1 1 1]
ROTB1_4f [1 1 1] ROTB2_5f [1 1 1] RP212 [1 1] RP218 [1 1]
RP305 [1 1] RP310 [1 1] RP320 [1 1] RP330 [1 1]
RP339 [1 1] RP346 [1 1] RP368 [1 1] RRDA10 [1 1 1]
RRDA5 [1 1 1] RRDA9 [1 1 1] RRDB6 [1 1 1] RROTB10 [1 1 1]
RROTB11 [1 1 1] RRSA12 [1 1 1] RRSA9 [1 1 1] RRSB10 [1 1 1]
RSA2_19 [1 1 1] RSA2_2 [1 1 1] RSA2_5a [1 1 1] RSA2_5bc [1 1 1]
RhGN1R2 [1] Rhiz1017 [1 1] Rhiz950 [1 1] Rhizospheric soil [1 1]
S1 [7 5 4] S11 [8 8] S15 [8 8] S19 [8 8]
S1N1 [1 1] SAUY002 [1] SCAU18 [1] SCAU202 [1 1]
SCAU46 [2 1] SCAU47 [1] SEMIA 384 [2 1] SEMIA 4004 [1 1 1]
SEMIA 403 [1 1 1] SEMIA 4061 [1 1 1] SEMIA 4062 [1 1 1] SEMIA 454 [1 1 1]
SEMIA 471 [1 1 50] SEMIA 484 [1 1 1] SEMIA 489 [1 1 52] SEMIA 6406 [1 1]
SEMIA 6409 [1 1] SJ24 [1 1] SJ5R2 [1 1] SR32b [1]
Sun-a 10 [1] TAL 182 strain TAL182 [1 13 6184] of Rhizobium sp. TAL182 TAL 182; USDA 9041 strain TAL182; USDA 9041 of Rhizobium sp. TAL182 TAL182 strain TAL182 [1 13 6184] of Rhizobium sp. TAL182
TE18 [1] TJ169 [4 3] TM1.10_ST33 [2 2 2] TM1.11_ST34 [2 2 2]
TM1.14_ST22 [2 2 2] TM1.15_ST24 [2 2 2] TM1.1_ST32 [2 2 2] TM1.29_ST21 [2 2 2]
TUTPVMZ124 [1 1] TUTPVMZ125 [1 1] TUTPVMZ128 [1 1] TUTPVSA21 [1 1]
UFLA02-09 [1] UFLA03-282 [1] UFLA4-30 [1] UFLA4-37 [1]
UFLA4-41 [1] UFLA4-42 [1] UFLA4-43 [1] UFLA4-61 [1]
UFLA4-66 [1] UFLA4-67 [1] USDA 2667, ATCC 14483, SEMIA 0430 [1] USDA 9032 [4 1 2]
USDA9032 [2 2 2] VKMM092 [1] Viking I [1] Viking I, (USDA 2743) [1]
Viking-1 [1] Viking1 [1 1] WzP15 [1] WzP3 [1]
Y1.14_ST27 [2 2 2] Y1.16_ST30 [2 2 2] Y1.17_ST38 [2 2 2] Y1.20_ST23 [2 2 2]
Y1.23_ST37 [2 2 2] Y1.4_ST31 [2 2 2] Y1.8_ST35 [2 2 2] Y18 [8 8]
Y2.11_ST36 [2 2 2] Y2.7_ST26 [2 2 2] Y2.9_ST29 [2 2 2] Y6-5 [1 1]
i1.9_ST40 [2 2 2] i2.11_ST19 [2 2 2] i2.1_ST39 [2 2 2] i2.6_ST8 [2 2 2]
i2.7_ST28 [2 2 2] i2.9_ST18 [2 2 2]
biovar
mimosae biovar mimosae [3 15036 2940 10 13558] of Rhizobium etli bv. mimosae
isolate
12a3 [2 1] B11 [1 1] EBRI 2 [1] EBRI 21 [1]
EBRI 26 [1] EBRI 27 [1] EBRI 3 [1] EFLRI 126 [1]
EFLRI 127 [1] EFLRI 128 [2 1] ISM1 [1] ISM2 [1]
ISM3 [1] ISM4 [1] PhyCEm-90 [1] mutant MB001 [1 1]
mutant MB002 [1 1] mutant MB004 [1 1] mutant MB005 [1 1] mutant MB009 [1 1]
mutant MB010 [1 1] mutant MB011 [1 1] mutant MB012 [1 1] mutant MB013 [1 1]
mutant MB014 [1 1] mutant MB015 [1 1] mutant MB016 [1 1] mutant MB017 [1 1]
mutant MB018 [1 1] mutant MB019 [1 1] mutant MB020 [1 1] mutant MB021 [1 1]
mutant MB022 [1 1] mutant MB023 [1 1] mutant MB024 [1 1] mutant MB025 [1 1]
mutant MB026 [1 1] mutant MB027 [1 1] mutant MB029 [1 1] mutant MB031 [1 1]
mutant MB032 [1 1] mutant MB033 [1 1] mutant MB034 [1 1] mutant MB035 [1 1]
mutant MB036 [1 1] mutant MB037 [1 1] mutant MB038 [1 1] mutant MB039 [1 1]
mutant MB040 [1 1] mutant MB041 [1 1] mutant MB042 [1 1] mutant MB043 [1 1]
mutant MB045 [1 1] mutant MB046 [1 1] mutant MB047 [1 1] mutant MB048 [1 1]
mutant MB049 [1 1] mutant MB050 [1 1] mutant MB051 [1 1] mutant MB052 [1 1]
mutant MB054 [1 1] mutant MB055 [1 1] mutant MB056 [1 1] mutant MB057 [1 1]
mutant MB059 [1 1] mutant MB060 [1 1] mutant MB065 [1 1]
nat-host
Mimosa affinis nat-host Mimosa affinis [1] of Rhizobium etli bv. mimosae Phaseolus vulgaris [5]
sub-species
CE3 strain CE3 [12 14 4 36 97 12]
culture-collection
CCBAU:23484 [1 1] NBRC:15573 [1 2]

Disclaimer: The NCBI taxonomy database is not an authoritative source for nomenclature or classification - please consult the relevant scientific literature for the most reliable information.

Reference: How to cite this resource - Schoch CL, et al. NCBI Taxonomy: a comprehensive update on curation, resources and tools. Database (Oxford). 2020: baaa062. PubMed: 32761142 PMC: PMC7408187.


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