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Taxonomy browser (Gardnerella vaginalis)

Gardnerella vaginalis

Taxonomy ID: 2702 (for references in articles please use NCBI:txid2702)
current name
Gardnerella vaginalis (Gardner and Dukes 1955) Greenwood and Pickett 1980
type strain of Gardnerella vaginalis: ATCC:14018, CCUG:3717, CIP:70.74, DSM:4944, JCM:11026, BCCM/LMG:7832, NCTC:10287, NCTC:10915, personal::594
homotypic synonym:
"Haemophilus hemolyticus vaginalis" Lutz et al. 1956, effective name 1)
"Corynebacterium vaginale" Zinnemann and Turner 1963, effective name 2)
Gardnerella vaginalis (Gardner and Dukes 1955) Greenwood and Pickett 1980 emend. Nouioui et al. 2018, emended name 3) in [Nouioui I et al. (2018c)]
Gardnerella vaginalis (Gardner and Dukes 1955) Greenwood and Pickett 1980 emend. Vaneechoutte et al. 2019, emended name 4) in [Vaneechoutte M et al. (2019)]
Haemophilus vaginalis Gardner and Dukes 1955 (Approved Lists 1980), nom. approb. 5),6)
NCBI BLAST name: high G+C Gram-positive bacteria
Rank: species
Genetic code: Translation table 11 (Bacterial, Archaeal and Plant Plastid)
Lineage( full )
cellular organisms; Bacteria; Terrabacteria group; Actinomycetota; Actinomycetes; Bifidobacteriales; Bifidobacteriaceae; Gardnerella
   Entrez records   
Database name Subtree links Direct links Links from type
Nucleotide 17,102 11,442 347
Protein 143,075 106,117 -
Structure 4 2 -
Genome 1 1 -
Popset 14 14 -
Conserved Domains 1 1 -
GEO Datasets 6 2 -
PubMed Central 3,217 3,217 -
Gene 10,838 3,924 -
SRA Experiments 105 95 -
Protein Clusters 1,931 1,931 -
Identical Protein Groups 66,363 55,344 -
BioProject 93 58 -
BioSample 304 266 11
Assembly 213 179 -
Genetic Testing Registry 1 1 -
PubChem BioAssay 17 17 -
Taxonomy 30 1 -

Notes:

Comments and References:

Nouioui I et al. (2018c), doi: 10.3389/fmicb.2018.02007, PubMed: abstract
Nouioui, I., Carro, L., García-López, M., Meier-Kolthoff, J.P., Woyke, T., Kyrpides, N.C., Pukall, R., Klenk, H.-P., Goodfellow, M., and Göker M. "Genome-based taxonomic classification of the phylum Actinobacteria." Front. Microbiol. (2018) 9:2007.
Vaneechoutte M et al. (2019), PubMed: abstract
Vaneechoutte, M., Guschin, A., Van Simaey, L., Gansemans, Y., Van Nieuwerburgh, F., and Cools, P. "Emended description of Gardnerella vaginalis and description of Gardnerella leopoldii sp. nov., Gardnerella piotii sp. nov. and Gardnerella swidsinskii sp. nov., with delineation of 13 genomic species within the genus Gardnerella." Int. J. Syst. Evol. Microbiol. (2019) 69(3):679-687.
image:Gardnerella vaginalis
Gardner HL & Dukes CD (1955)
Gardner, H.L., and Dukes, C.D. "Haemophilus vaginalis; a newly defined specific infection, previously classified as 'nonspecific' vaginiis." Am. J. Obstet. Gynecol. (1955) 69:962-976. [No abstract available.]
Greenwood JR & Pickett MJ (1980)
Greenwood, J.R., and Pickett, M.J. "Transfer of Haemophilus vaginalis Gardner and Dukes to a new genus, Gardnerella: G. vaginalis (Gardner and Dukes) comb. nov." Int. J. Syst. Bacteriol. (1980) 30:170-178. [No PubMed record available.]
Skerman VBD et al. (1980) (Haemophilus vaginalis)
Skerman, V.B.D., McGowan, V., and Sneath, P.H.A. (editors). "Approved lists of bacterial names." Int. J. Syst. Bacteriol. (1980) 30:225-420.
van Esbroeck M et al. (1996)
van Esbroeck, M., Vandamme, P., Falsen, E., Vancanneyt, M., Moore, E., Pot, B., Gavini, F., Kersters, K., and Goossens, H. "Polyphasic approach to the classification and identification of Gardnerella vaginalis and unidentified Gardnerella vaginalis-like coryneforms present in bacterial vaginosis." Int. J. Syst. Bacteriol. (1996) 46:675-682.

External Information Resources (NCBI LinkOut)

LinkOut Subject LinkOut Provider
Gardnerella vaginalis meta-databases BacDive
14 records from this provider organism-specific BioCyc
Gardnerella vaginalis (Gardner and Dukes 1955) Greenwood and Pickett 1980 taxonomy/phylogenetic Encyclopedia of life
6 records from this provider organism-specific Genomes On Line Database
Show Biotic Interactions taxonomy/phylogenetic Global Biotic Interactions
Gardnerella vaginalis culture/stock collections Global Catalogue of Microorganisms
58 records from this provider organism-specific Integrated Microbial Genomes
OMA taxonomy/phylogenetic OMA Browser: Orthologous MAtrix
Wikipedia taxonomy/phylogenetic iPhylo
Notes:
Groups interested in participating in the LinkOut program should visit the LinkOut home page.
A list of our current non-bibliographic LinkOut providers can be found here.

Information from sequence entries

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Disclaimer: The NCBI taxonomy database is not an authoritative source for nomenclature or classification - please consult the relevant scientific literature for the most reliable information.

Reference: How to cite this resource - Schoch CL, et al. NCBI Taxonomy: a comprehensive update on curation, resources and tools. Database (Oxford). 2020: baaa062. PubMed: 32761142 PMC: PMC7408187.


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