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Taxonomy browser (Fragilariopsis cylindrus)

Fragilariopsis cylindrus

Taxonomy ID: 186039 (for references in articles please use NCBI:txid186039)
current name
Fragilariopsis cylindrus
homotypic synonym:
Nitzschia cylindrus
NCBI BLAST name: diatoms
Rank: species
Genetic code: Translation table 1 (Standard)
Mitochondrial genetic code: Translation table 1 (Standard)
Plastid genetic code: Translation table 11 (Bacterial, Archaeal and Plant Plastid)
Lineage( full )
cellular organisms; Eukaryota; Sar; Stramenopiles; Ochrophyta; Bacillariophyta; Bacillariophyceae; Bacillariophycidae; Bacillariales; Bacillariaceae; Fragilariopsis
   Entrez records   
Database name Subtree links Direct links
Nucleotide 22,197 21,923
Protein 18,357 246
Structure 1 1
Genome 1 1
Popset 8 8
GEO Datasets 86 83
PubMed Central 352 352
Gene 141 141
SRA Experiments 155 147
Identical Protein Groups 18,205 131
BioProject 14 10
BioSample 149 145
Assembly 3 -
Taxonomy 2 1

Genome Information

Go to NCBI genomic BLAST page for Fragilariopsis cylindrus

External Information Resources (NCBI LinkOut)

LinkOut Subject LinkOut Provider
Fragilariopsis cylindrus taxonomy/phylogenetic AlgaeBase
Fragilariopsis cylindrus (Grunow) Krieger taxonomy/phylogenetic Encyclopedia of life
GOLD: Go0002810 organism-specific Genomes On Line Database
Show Biotic Interactions taxonomy/phylogenetic Global Biotic Interactions
Fragilariopsis cylindrus culture/stock collections Global Catalogue of Microorganisms
Fragilariopsis cylindrus (Grunow) Krieger in Helmcke and Krieger taxonomy/phylogenetic Integrated Taxonomic Information System
2 records from this provider taxonomy/phylogenetic Ocean Biogeographic Information System
WebScipio: Fragilariopsis cylindrus organism-specific WebScipio - eukaryotic gene identification
2 records from this provider taxonomy/phylogenetic World Register of Marine Species
diArk: Fragilariopsis cylindrus organism-specific diArk - a resource for eukaryotic genome research
Notes:
Groups interested in participating in the LinkOut program should visit the LinkOut home page.
A list of our current non-bibliographic LinkOut providers can be found here.

Information from sequence entries

Organism modifiers

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strain
2-E-F [1 1] 3 [1 1] Antarctic [2 1102] CCMP 1102 [5 4 18606 2 1]
CCMP1102 [1 65 5 276 1 18114 69] E8C2 [2 2 2] F cyl new [1] NIES-3887 [1]
NIES-3966 [1] Real 1 [1] Real 9 [1] WAP34 [1]
WAP38 [2] WAP_48 [1]
isolate
C50 [2 2 1] CCAP 1023/1 [1 1] RCC4291 [1] SC_44 [2 1 1]
SC_46 [2 1 1] SC_47 [2 1 1] SC_48 [2 1 1] SC_50 [2 1 1]
SC_52 [2 1 1] SC_53 [2 1 1] SC_54 [2 1 1]
specimen-voucher
CCMP 1102 [1 1] CCMP1273 [1] CCMP557 [1] IK_CCMP_1430 [1 1]
IK_MTA162 [1 1]
culture-collection
CCMP:1102 [1] CCMP:1273 [4 2] CCMP:557 [3 2] NIES:3887 [1]
NIES:3966 [1] RCC:4291 [1]

Disclaimer: The NCBI taxonomy database is not an authoritative source for nomenclature or classification - please consult the relevant scientific literature for the most reliable information.

Reference: How to cite this resource - Schoch CL, et al. NCBI Taxonomy: a comprehensive update on curation, resources and tools. Database (Oxford). 2020: baaa062. PubMed: 32761142 PMC: PMC7408187.


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