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Taxonomy browser (Mycobacterium tuberculosis)

Mycobacterium tuberculosis

Taxonomy ID: 1773 (for references in articles please use NCBI:txid1773)
current name
Mycobacterium tuberculosis (Zopf 1883) Lehmann and Neumann 1896 (Approved Lists 1980) in [Skerman VBD et al. (1980)]
type strain of Mycobacterium tuberculosis: ATCC:27294, personal::H37Rv, NCTC:7416, ATCC:25618, ATCC:9360, CCUG:37357, CCUG:38148, CIP:104475, CIP:64.31, CNCTC:7301, NCTC:13144
basionym:
"Bacterium tuberculosis" Zopf 1883, effective name
homotypic synonym:
Mycobacterium tuberculosis (Zopf 1883) Lehmann and Neumann 1896 (Approved Lists 1980) emend. Riojas et al. 2018, emended name
homotypic synonym:
"Bacillus tuberculosis" (Zopf 1883) Klein 1884, effective name 1)
NCBI BLAST name: high G+C Gram-positive bacteria
Rank: species
Genetic code: Translation table 11 (Bacterial, Archaeal and Plant Plastid)
Other names:
heterotypic synonym
"Mycobacterium tuberculosis typus humanus" Lehmann and Neumann 1907
heterotypic synonym
"Mycobacterium tuberculosis var. hominis" Bergey et al. 1934, effective name 2)
Lineage( full )
cellular organisms; Bacteria; Bacillati; Actinomycetota; Actinomycetes; Mycobacteriales; Mycobacteriaceae; Mycobacterium; Mycobacterium tuberculosis complex
   Entrez records   
Database name Subtree links Direct links Links from type
Nucleotide 1,468,144 1,241,806 3,236
Protein 20,276,991 12,988,740 -
Structure 3,401 1,494 -
Popset 461 434 -
Conserved Domains 6 5 -
GEO Datasets 8,048 4,213 -
PubMed Central 92,276 87,346 -
Gene 127,633 1 -
SRA Experiments 247,088 221,947 -
GEO Profiles 22,220 16,198 -
Protein Clusters 2,880 2,880 -
Identical Protein Groups 812,023 751,684 -
BioProject 4,437 1,592 -
BioSample 255,360 231,743 5,100
Datasets Genome 7,877 5,830 -
PubChem BioAssay 11,528 10,588 -
Taxonomy 2,915 1 -

Notes:

Comments and References:
Skerman VBD et al. (1980)
Skerman, V.B.D., McGowan, V., and Sneath, P.H.A. "Approved Lists of Bacterial Names." Intl. J. Syst. Bacteriol. (1980) 30(1):225-420.
Lehmann KB & Neumann R (1896)
Lehman, K.B., and Neumann, R. Atlas und Grundriss der Bakeriologie und Lehrbuch der speziellen bakteriologischen Diagnositk. 1st Ed., (1896) J.F. Lehmann, Munchen. [No PubMed record available.]
Riojas MA et al. (2018)
Riojas, M.A., McGough, K.J., Rider-Riojas, C.J., Rastogi, N., and Hazbon, M.H. "Phylogenomic analysis of the species of the Mycobacterium tuberculosis complex demonstrates that Mycobacterium africanum, Mycobacterium bovis, Mycobacterium caprae, Mycobacterium microti and Mycobacterium pinnipedii are later heterotypic synonyms of Mycobacterium tuberculosis." Int. J. Syst. Evol. Microbiol. (2018) 68:324-332.
Runyon EH et al. (1967)
Runyon, E.H., et al. "Mycobacterium tuberculosis, M. bovis and M. microti species descriptions." Zentralbl. Bakteriol., I Abt., Orig. (1967) 204:405-413. [No PubMed record available.]
Zopf W (1883)
Zopf, W.: Die Spaltpilze. Edward Trewendt, Breslau, 1883, pp. 1-100. [No PubMed record available.]

External Information Resources (NCBI LinkOut)

LinkOut Subject LinkOut Provider
Mycobacterium tuberculosis meta-databases BacDive
32 records from this provider organism-specific BioCyc
dryaddb supplemental materials Dryad Digital Repository
GOLD: 4381 Organisms organism-specific Genomes On Line Database
Mycobacterium tuberculosis culture/stock collections Global Catalogue of Microorganisms
Related Immune Epitope Information gene/protein/disease-specific Immune Epitope Database and Analysis Resource
741 records from this provider organism-specific Integrated Microbial Genomes
Mycobacterium tuberculosis taxonomy/phylogenetic Lifemap
TubercuList taxonomy/phylogenetic NCBI taxonomy bookmarks
OMA taxonomy/phylogenetic OMA Browser: Orthologous MAtrix
Mycobacterium tuberculosis (T) | SeqCode Registry taxonomy/phylogenetic SeqCode Registry
Bacillus tuberculosis taxonomy/phylogenetic Systematic Mycology and Microbiology Laboratory, Fungal Databases
Sanger companies/research institutes The Sanger Centre
Mycobacterium tuberculosis taxonomy/phylogenetic TreeBase
Wikipedia taxonomy/phylogenetic iPhylo
Notes:
Groups interested in participating in the LinkOut program should visit the LinkOut home page.
A list of our current non-bibliographic LinkOut providers can be found here.

Information from sequence entries

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Disclaimer: The NCBI taxonomy database is not an authoritative source for nomenclature or classification - please consult the relevant scientific literature for the most reliable information.

Reference: How to cite this resource - Schoch CL, et al. NCBI Taxonomy: a comprehensive update on curation, resources and tools. Database (Oxford). 2020: baaa062. PubMed: 32761142 PMC: PMC7408187.


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