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Taxonomy browser (rat gut metagenome)

rat gut metagenome

Taxonomy ID: 1436733 (for references in articles please use NCBI:txid1436733)
current name
rat gut metagenome
NCBI BLAST name: metagenomes
Rank: species
Genetic code: Translation table 11 (Bacterial, Archaeal and Plant Plastid)
Mitochondrial genetic code: Translation table 2 (Vertebrate Mitochondrial)
Plastid genetic code: Translation table 11 (Bacterial, Archaeal and Plant Plastid)
Lineage( full )
unclassified entries; unclassified sequences; metagenomes; organismal metagenomes
   Entrez records   
Database name Direct links
Nucleotide 602
GEO Datasets 186
PubMed Central 11
SRA Experiments 23,053
BioProject 593
BioSample 22,489
Taxonomy 1

Information from sequence entries

Organism modifiers

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strain
Fischer 344 [1] many [1]
isolate
feces flora [1 16] gut of CT+Ab1 [1] gut of CT+Ab2 [1] gut of CT+Ab3 [1]
gut of CT1 [1] gut of CT2 [1] gut of CT3 [1] gut of HCD+Ab1 [1]
gut of HCD+Ab2 [1] gut of HCD+Ab3 [1] gut of HCD1 [1] gut of HCD2 [1]
gut of HCD3 [1]
nat-host
Rattus norvegicus [8565]
breed
F344 [1] Fischer 344 [1] SD [115 163] rat [246 237]


Disclaimer: The NCBI taxonomy database is not an authoritative source for nomenclature or classification - please consult the relevant scientific literature for the most reliable information.

Reference: How to cite this resource - Schoch CL, et al. NCBI Taxonomy: a comprehensive update on curation, resources and tools. Database (Oxford). 2020: baaa062. PubMed: 32761142 PMC: PMC7408187.


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