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Taxonomy browser (Sphingomonas carotinifaciens)

Sphingomonas carotinifaciens

Taxonomy ID: 1166323 (for references in articles please use NCBI:txid1166323)
current name
Sphingomonas carotinifaciens Madhaiyan et al. 2017
type strain of Sphingomonas carotinifaciens: personal::L9-754, DSM:27347, KACC:17595
homotypic synonym:
Sphingomonas carotinifaciens Madhaiyan et al. 2017 emend. Madhaiyan et al., emended name 1) in [Madhaiyan M et al. (in press_2020)]
includes:
Sphingomonas sp. L9-754
NCBI BLAST name: a-proteobacteria
Rank: species
Genetic code: Translation table 11 (Bacterial, Archaeal and Plant Plastid)
Other names:
heterotypic synonym
Sphingomonas aeria Xue et al. 2018
type strain of Sphingomonas aeria: personal::B093034, CFCC:13949, BCCM/LMG:30133
includes:
Sphingomonas sp. B093034
Lineage( full )
cellular organisms; Bacteria; Pseudomonadota; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas
   Entrez records   
Database name Direct links Links from type
Nucleotide 195 69
Protein 10,035 -
Genome 1 -
Popset 1 -
PubMed Central 2 -
SRA Experiments 1 -
Identical Protein Groups 8,346 -
BioProject 7 -
BioSample 4 4
Assembly 4 -
Taxonomy 1 -

Notes:

Comments and References:
Madhaiyan M et al. (in press_2020), PubMed: abstract
Madhaiyan, M., Saravanan, V.S., Wirth, J.S., and Whitman, W.B. "Reclassification of Sphingomonas aeria as a later heterotypic synonym of Sphingomonas carotinifaciens based on whole-genome sequence analysis." Int. J. Syst. Evol. Microbiol. (in press)
Madhaiyan M et al. (2017c)
Madhaiyan, M., Alex, T.H.H., Cho, H., Kim, S.-J., Weon, H.-Y., Kwon, S.-W., Whitman, W.B., and Ji, L. "Sphingomonas jatrophae sp. nov. and Sphingomonas carotinifaciens sp. nov., two yellow-pigmented endophytes isolated from stem tissues of Jatropha curcas L." Int. J. Syst. Evol. Microbiol. (2017) 67:5150-5158.
Madhaiyan M et al. (2020)
Madhaiyan, M., Saravanan, V.S., Wirth, J.S., and Whitman, W.B. "Reclassification of Sphingomonas aeria as a later heterotypic synonym of Sphingomonas carotinifaciens based on whole-genome sequence analysis." Int. J. Syst. Evol. Microbiol. (2020) 70(4):2355-2358.
Xue H et al. (2018)
Xue, H., Piao, C.-g., Wang, X.-z., Lin, C.-l. Guo, M.-w., and Li, Y. "Sphingomonas aeria sp. nov., isolated from air." Int. J. Syst. Evol. Microbiol. (2018) 68:2866-2871.
Park HK et al. (2015)
Park, H.K., Han, J.-H., Kim, T.-S., Joung, Y., Cho, S.-H., Kwon, S.-W., and Kim, S.B. "Sphingomonas aeria sp. nov. from indoor air of a pharmaceutical environment." Antonie van Leeuwenhoek (2015) 107:47-53.

External Information Resources (NCBI LinkOut)

LinkOut Subject LinkOut Provider
Sphingomonas carotinifaciens meta-databases BacDive
2 records from provider organism-specific Integrated Microbial Genomes
Notes:
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Information from sequence entries

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Disclaimer: The NCBI taxonomy database is not an authoritative source for nomenclature or classification - please consult the relevant scientific literature for the most reliable information.

Reference: How to cite this resource - Schoch CL, et al. NCBI Taxonomy: a comprehensive update on curation, resources and tools. Database (Oxford). 2020: baaa062. PubMed: 32761142 PMC: PMC7408187.


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