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Taxonomy browser (Thiomicrospira)

Thiomicrospira

Taxonomy ID: 933 (for references in articles please use NCBI:txid933)
current name
Thiomicrospira Kuenen and Veldkamp 1972 (Approved Lists 1980) emend. Boden et al. 2017, nom. approb. 1)
NCBI BLAST name: g-proteobacteria
Rank: genus
Genetic code: Translation table 11 (Bacterial, Archaeal and Plant Plastid)
Other names:
heterotypic synonym
Thialkalimicrobium
heterotypic synonym
Thioalkalimicrobium Sorokin et al. 2001 emend. Sorokin et al. 2002
Lineage( full )
cellular organisms; Bacteria; Pseudomonadota; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae
   Entrez records   
Database name Subtree links Direct links
Nucleotide 899 -
Protein 46,543 106
Structure 2 -
Genome 5 1
Popset 22 22
GEO Datasets 3 -
PubMed Central 512 511
Gene 1,737 -
SRA Experiments 27 1
Protein Clusters 1,731 35
Identical Protein Groups 38,794 106
BioProject 32 -
BioSample 56 -
Assembly 32 -
Taxonomy 66 1

Notes:

Comments and References:

Thiomicrospira (LPSN link)
Thioalkalimicrobium (LPSN link)
Boden R et al. (2017)
Boden, R., Scott, K.M., Williams, J., Russel, S., Antonen, K., Rae, A.W., and Hutt, L.P. "An evaluation of Thiomicrospira, Hydrogenovibrio and Thioalkalimicrobium: reclassification of four species of Thiomicrospira to each Thiomicrorhabdus gen. nov. and Hydrogenovibrio, and reclassification of all four species of Thioalkalimicrobium to Thiomicrospira." Int. J. Syst. Evol. Microbiol. (2017) 67:1140-1151.
Brinkhoff T et al. (1999b)
Brinkhoff, T., Muyzer, G., Wirsen, C.O., and Kuever, J. "Thiomicrospira chilensis sp. nov., a mesophilic obligately chemolithoautotrophic sulfuroxidizing bacterium isolated from a Thioploca mat." Int. J. Syst. Bacteriol. (1999) 49:875-879. (Note: Brinkhoff et al. describe rod-shaped Thiomicrospira spp.; so differentiation of Thiomicrospira spp. from Thiobacillus spp. by morphology alone is no longer valid.)
De Vos P et al. (2005)
De Vos, P., Truper, H.G., and Tindall, B.J. "Judicial Commission of the International Committee on Systematics of Prokaryotes Xth International (IUMS) Congress of Bacteriology and Applied Microbiology. Minutes of the meetings, 28, 29 and 31 July and 1 August 2002, Paris, France." Int. J. Syst. Evol. Microbiol. (2005) 55:525-532. [No PubMed record available.] (Note: the Judicial Commission agrees that the genus names should revert to the original form 'Thioalkalivibrio', 'Thioalkalicoccus', and 'Thioalkalmicrobium'.)
Kuenen JG & Veldkamp H (1972)
Kuenen, J.G., and Veldkamp, H. "Thiomicrospira pelophila, gen. n., sp. n., a new obligately chemolithotrophic colourless sulfur bacterium." Antonie van Leeuwenhoek (1972) 38:241-256. [No abstract available.]
List Editor IJSEM (2001) (Thialkalimicrobium sibiricum)
List Editor, IJSEM "Notification that new names and new combinations have appeared in volume 50, part 2, of the IJSEM." Int. J. Syst. Evol. Microbiol. (2001) 51:795-796. (Note: the genus name is corrected from Thioalkalimicrobium to Thialkalimicrobium and the species name is corrected to sibiricum upon notification.)
Skerman VBD et al. (1980)
Skerman, V.B.D., McGowan, V., and Sneath, P.H.A. (editors). "Approved lists of bacterial names." Int. J. Syst. Bacteriol. (1980) 30:225-420. [No PubMed record available.]
Sorokin DY et al. (2001)
Sorokin, D.Y., Lysenko, A.M., Mityushina, L.L., Tourova, T.P., Jones, B.E., Rainey, F.A., Robertson, L.A., and Kuenen, G.J. "Thioalkalimicrobium aerophilum gen. nov., sp. nov. and Thioalkalimicrobium sibericum sp. nov., and Thioalkalivibrio versutus gen.nov., sp. nov., Thioalkalivibrio nitratis sp. nov. and Thioalkalivibrio denitrificans sp.nov., novel obligately alkaliphilic and obligately chemolithoautotrophic sulfur-oxidazing bacteria from soda lakes." Int. J. Syst. Evol. Microbiol. (2001) 51:565-580.
Sorokin DY et al. (2002b)
Sorokin, D.Y., Gorlenko, V.M., Tourova, T.P., Tsapin, A.I., Nealson, K.H., and Kuenen, G.J. "Thioalkalimicrobium cyclicum sp. nov. and Thioalkalivibrio jannaschii sp. nov., novel species of haloalkaliphilic, obligately chemolithoautotrophic sulfur-oxidizing bacteria from hypersaline alkaline Mono Lake (California)." Int. J. Syst. Evol. Microbiol. (2002) 52:913-920.

External Information Resources (NCBI LinkOut)

LinkOut Subject LinkOut Provider
Thiomicrospira taxonomy/phylogenetic Encyclopedia of life
3 records from this provider organism-specific Integrated Microbial Genomes
Thiomicrospira taxonomy/phylogenetic Lifemap
LBSN taxonomy/phylogenetic List of Bacterial names with Standing in Nomenclature
2 records from this provider taxonomy/phylogenetic Ocean Biogeographic Information System
Thiomicrospira | SeqCode Registry taxonomy/phylogenetic SeqCode Registry
2 records from provider taxonomy/phylogenetic World Register of Marine Species
Notes:
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A list of our current non-bibliographic LinkOut providers can be found here.

Disclaimer: The NCBI taxonomy database is not an authoritative source for nomenclature or classification - please consult the relevant scientific literature for the most reliable information.

Reference: How to cite this resource - Schoch CL, et al. NCBI Taxonomy: a comprehensive update on curation, resources and tools. Database (Oxford). 2020: baaa062. PubMed: 32761142 PMC: PMC7408187.


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