Taxonomy browser (Fusobacterium varium)

Entrez

PubMed

Nucleotide

Protein

Search for as lock

levels using filter:

Taxonomy browser (Fusobacterium varium)

Fusobacterium varium

Taxonomy ID: 856 (for references in articles please use NCBI:txid856)

current name

Fusobacterium varium (Eggerth and Gagnon 1933) Moore and Holdeman 1969

type strain of Fusobacterium varium: ATCC :8501, CCUG :4858, JCM :6320, NCTC :10560, DSM :19868

homotypic synonym:

"Bacteroides varius" Eggerth and Gagnon 1933, effective name¹⁾

"Sphaerophorus varius" (Eggerth and Gagnon 1933) Prévot 1938, effective name²⁾

"Sphaerophorus pseudonecrophorus" (Harris and Brown 1927) Prevot 1940, effective name³⁾

"Pseudobacterium varium" (Eggerth and Gagnon 1933) Krasil'nikov 1949, effective name⁴⁾

equivalent:

Fusibacterium varium

NCBI BLAST name: fusobacteria
Rank: species
Genetic code: Translation table 11 (Bacterial, Archaeal and Plant Plastid)
Other names:

heterotypic synonym

"Actinomyces pseudo-necro-phorus" Harris and Brown 1927, effective name⁵⁾

heterotypic synonym

"Sphaerophorus varius var. sulfitoreductans" Sebald. 1962, effective name⁶⁾

heterotypic synonym

Fusobacterium pseudonecrophorum (ex Harris and Brown 1927) Shinjo et al. 1990

type strain of Fusobacterium pseudonecrophorum: personal::Fn521, ATCC :51644, JCM :3722

equivalent:

Fusibacterium pseudonecrophorum

heterotypic synonym

Fusobacterium necrophorum biovar C

Lineage( full ): cellular organisms; Bacteria; Fusobacteriota; Fusobacteriia; Fusobacteriales; Fusobacteriaceae; Fusobacterium

Entrez records
Database name	Subtree links	Direct links	Links from type
Nucleotide	4,360	4,290	20
Protein	55,579	49,589	-
Structure	1	1	-
Genome	1	1	-
Popset	4	4	-
PubMed Central	415	415	-
Gene	3,146	1	-
SRA Experiments	36	29	-
Protein Clusters	1,343	1,343	-
Identical Protein Groups	33,049	32,929	-
BioProject	28	25	-
BioSample	91	87	4
Assembly	32	29	-
PubChem BioAssay	25	25	-
Taxonomy	2	1	-

Notes:

1) This taxonomic name has been effectively published but not validly published under the rules of the International Code of Nomenclature of Prokaryotes (Bacteriological Code).
2) This taxonomic name has been effectively published but not validly published under the rules of the International Code of Nomenclature of Prokaryotes (Bacteriological Code).
3) This taxonomic name has been effectively published but not validly published under the rules of the International Code of Nomenclature of Prokaryotes (Bacteriological Code).
4) This taxonomic name has been effectively published but not validly published under the rules of the International Code of Nomenclature of Prokaryotes (Bacteriological Code).
5) This taxonomic name has been effectively published but not validly published under the rules of the International Code of Nomenclature of Prokaryotes (Bacteriological Code).
6) This taxonomic name has been effectively published but not validly published under the rules of the International Code of Nomenclature of Prokaryotes (Bacteriological Code).

Comments and References:

Bailey GD & Love DN (1993)

Bailey, G.D., and Love, D.N. "Fusobacterium pseudonecrophorum is a synonym for Fusobacterium varium." Int. J. Syst. Bacteriol. (1993) 43:819-821. [No PubMed record available.]

Eggerth AH & Gagnon BH (1933), other link:http://jb.asm.org/content/25/4/389.long

Eggerth, A.H., and Gagnon, B.H. "The bacteroides of human feces." J. Bacteriol. (1933) 25:389-413. [No abstract available.]

Krasil'nikov NA (1949)

Krasil'nikov, N.A.: Guide to the Bacteria and Actinomycetes [Opredelitelv Bakterii i Actinomicetov], (1949). Akad. Nauk SSSR, Moscow, pp. 1-830. [No PubMed record available.]

Moore WEC & Holdeman LV (1969)

Moore, W.E.C., and Holdeman, L.V. "Anaerobic gram-negative non-sporeforming rods." In: E.P. Cato, C.S. Cummins, L.V. Holdeman, J.L. Johnson, W.E.C. Moore, R.M. Smibert, and L.D.S. Smith (eds): Outline of Clinical Methods in Anaerobic Bacteriology, 1st revision, Virginia Polytechnic Institute, Anaerobe Laboratory, Blacksburg, Virginia, 1969, pp. 1-107. [No PubMed record available.]

Sebald M (1962)

Sebald, M. "Etude sur les bacteries anaerobies gram-negatives asporulees." Theses de l'Universite Paris, Imprimerie Barneoud S.A. Laval, France (1962). pp. 1-171. [No PubMed record available.]

Shinjo T et al. (1990)

Shinjo, T., Hiraiwa, K., and Miyazato, S. "Recognition of biovar C of Fusobacterium necrophorum (Flugge) Moore and Holdeman as Fusobacterium pseudonecrophorum sp. nov., nom. rev. (ex Prevot 1940)." Int. J. Syst. Bacteriol. (1990) 40:71-73.

Skerman VBD et al. (1980)

Skerman, V.B.D., McGowan, V., and Sneath, P.H.A. (editors). "Approved lists of bacterial names." Int. J. Syst. Bacteriol. (1980) 30:225-420. [No PubMed record available.]

External Information Resources (NCBI LinkOut)

LinkOut	Subject	LinkOut Provider
Fusobacterium varium	meta-databases	BacDive
2 records from this provider	organism-specific	BioCyc
Fusobacterium pseudonecrophorum (ex Harris and Brown 1927) Shinjo et al., 1990	taxonomy/phylogenetic	Encyclopedia of life
GOLD: Go0408165	organism-specific	Genomes On Line Database
Show Biotic Interactions	taxonomy/phylogenetic	Global Biotic Interactions
Fusobacterium varium	culture/stock collections	Global Catalogue of Microorganisms
4 records from this provider	organism-specific	Integrated Microbial Genomes
Fusobacterium varium \| SeqCode Registry	taxonomy/phylogenetic	SeqCode Registry

Notes:: Groups interested in participating in the LinkOut program should visit the LinkOut home page.
A list of our current non-bibliographic LinkOut providers can be found here.

Information from sequence entries

Show organism modifiers

Disclaimer: The NCBI taxonomy database is not an authoritative source for nomenclature or classification - please consult the relevant scientific literature for the most reliable information.

Reference: How to cite this resource - Schoch CL, et al. NCBI Taxonomy: a comprehensive update on curation, resources and tools. Database (Oxford). 2020: baaa062. PubMed: 32761142 PMC: PMC7408187.

Comments and questions to info@ncbi.nlm.nih.gov

[Help]

[Search]

[NLM NIH]

[Disclaimer]