Taxonomy browser (Parabacteroides distasonis)

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Taxonomy browser (Parabacteroides distasonis)

Parabacteroides distasonis

Taxonomy ID: 823 (for references in articles please use NCBI:txid823)

current name

Parabacteroides distasonis (Eggerth and Gagnon 1933) Sakamoto and Benno 2006 emend. Hahnke et al. 2016

type strain of Parabacteroides distasonis: ATCC :8503, CCUG :4941, CIP:104284, DSM :20701, JCM :5825, NCTC :11152

homotypic synonym:

"Ristella distasonis" (Eggerth and Gagnon 1933) Prévot 1938, effective name¹⁾

"Pseudobacterium distasonis" (Eggerth and Gagnon 1933) Krasil'nikov 1949, effective name²⁾

"Bacteroides fragilis subsp. distasonis" (Eggerth and Gagnon 1933) Holdeman and Moore 1970, effective name³⁾

Bacteroides distasonis Eggerth and Gagnon 1933 (Approved Lists 1980), nom. approb.⁴⁾

NCBI BLAST name: CFB group bacteria
Rank: species
Genetic code: Translation table 11 (Bacterial, Archaeal and Plant Plastid)

Lineage( full ): cellular organisms; Bacteria; FCB group; Bacteroidota/Chlorobiota group; Bacteroidota; Bacteroidia; Bacteroidales; Tannerellaceae; Parabacteroides

Entrez records
Database name	Subtree links	Direct links	Links from type
Nucleotide	252,634	239,395	32
Protein	457,208	415,949	-
Structure	60	1	-
Genome	1	1	-
Popset	9	9	-
Conserved Domains	1	-	-
GEO Datasets	34	13	-
PubMed Central	2,010	2,010	-
Gene	12,768	8,405	-
SRA Experiments	1,004	984	-
Protein Clusters	1,258	1,258	-
Identical Protein Groups	192,053	188,118	-
BioProject	186	173	-
BioSample	4,623	4,572	25
Assembly	1,049	1,004	-
PubChem BioAssay	39	38	-
Taxonomy	9	1	-

Notes:

1) This taxonomic name has been effectively published but not validly published under the rules of the International Code of Nomenclature of Prokaryotes (Bacteriological Code).
2) This taxonomic name has been effectively published but not validly published under the rules of the International Code of Nomenclature of Prokaryotes (Bacteriological Code).
3) This taxonomic name has been effectively published but not validly published under the rules of the International Code of Nomenclature of Prokaryotes (Bacteriological Code).
4) 'Nom. approb.' (= nomen approbatum, = approved name) refers to a name which is included in the Approved Lists of Bacterial Names.

Comments and References:

Cato EP & Johnson JL (1976)

Cato, E.P., and Johnson, J.L. "Reinstatement of species rank for Bacteroides fragilis, B. ovatus, B. distasonis, B. thetaiotaomicron, and B. vulgatus: Designation of neotype strains for Bacteroides fragilis (Veillon and Zuber) Castellani and Chalmers and Bacteroides thetaiotaomicron (Distaso) Castellani and Chalmers." Int. J. Syst. Bacteriol. (1976) 26:230-237. [No PubMed record available.]

Eggerth AH & Gagnon BH (1933), other link:http://jb.asm.org/content/25/4/389.long

Eggerth, A.H., and Gagnon, B.H. "The bacteroides of human feces." J. Bacteriol. (1933) 25:389-413. [No abstract available.]

Hahnke RL et al. (2016)

Hahnke, R.L., Meier-Kolthoff, J.P., García-López, M., Mukherjee, S., Huntemann, M., Ivanova, N.N., Woyke, T., Kyrpides, N.C., Klenk, H.-P., and Göker, M. "Genome-based taxonomic classification of Bacteroidetes." Front. Microbiol. (2016) 7:2003.

Holdeman LV & Moore WEC (1970b)

Holdeman, L.V., and Moore, W.E.C. "Bacteroides." In: E.P. Cato, C.S. Cummins, L.V. Holdeman, J.L. Johnson, W.E.C. Moore, R.M. Smibert, and L.DS. Smith (eds.), Outline of Clinical Methods in Anaerobic Bacteriology, 2nd revision, Virginia Polytechnic Institute, Anaerobe Laboratory, Blacksburg, Virginia, (1970). pp. 33-44. [No PubMed record available.]

Krasil'nikov NA (1949)

Krasil'nikov, N.A.: Guide to the Bacteria and Actinomycetes [Opredelitelv Bakterii i Actinomicetov], (1949). Akad. Nauk SSSR, Moscow, pp. 1-830. [No PubMed record available.]

List of Changes in Taxonomic Opinion No. 26 (2017)

"Notification of changes in taxonomic opinion previously published outside the IJSEM." Int. J. Syst. Evol. Microbiol. (2017) 67(7):2081-2086.

Prévot AR (1938)

Prévot, A.R. "Etudes de systematique bacterienne." Ann. Inst. Pasteur (Paris) (1938) 60:285-307. [No PubMed record available.]

Sakamoto M & Benno Y (2006)

Sakamoto, M., and Benno, Y. "Reclassification of Bacteroides distasonis, Bacteroides goldsteinii and Bacteroides merdae as Parabacteroides distasonis gen. nov., comb. nov., Parabacteroides goldsteinii comb. nov. and Parabacteroides merdae comb. nov." Int. J. Syst. Evol. Microbiol. (2006) 56(7):1599-1605.

Skerman VBD et al. (1980) (Bacteroides distasonis)

Skerman, V.B.D., McGowan, V., and Sneath, P.H.A. (editors). "Approved lists of bacterial names." Int. J. Syst. Bacteriol. (1980) 30:225-420. [No PubMed record available.]

External Information Resources (NCBI LinkOut)

LinkOut	Subject	LinkOut Provider
Parabacteroides distasonis	meta-databases	BacDive
2 records from this provider	organism-specific	BioCyc
Parabacteroides distasonis (Eggerth and Gagnon 1933) Sakamoto and Benno 2006	taxonomy/phylogenetic	Encyclopedia of life
GOLD: 37 Organisms	organism-specific	Genomes On Line Database
Show Biotic Interactions	taxonomy/phylogenetic	Global Biotic Interactions
Parabacteroides distasonis	culture/stock collections	Global Catalogue of Microorganisms
60 records from this provider	organism-specific	Integrated Microbial Genomes
Parabacteroides distasonis (T) \| SeqCode Registry	taxonomy/phylogenetic	SeqCode Registry

Notes:: Groups interested in participating in the LinkOut program should visit the LinkOut home page.
A list of our current non-bibliographic LinkOut providers can be found here.

Information from sequence entries

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Disclaimer: The NCBI taxonomy database is not an authoritative source for nomenclature or classification - please consult the relevant scientific literature for the most reliable information.

Reference: How to cite this resource - Schoch CL, et al. NCBI Taxonomy: a comprehensive update on curation, resources and tools. Database (Oxford). 2020: baaa062. PubMed: 32761142 PMC: PMC7408187.

Comments and questions to info@ncbi.nlm.nih.gov

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