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Taxonomy browser (Colletotrichum fructicola)

Colletotrichum fructicola

Taxonomy ID: 690256 (for references in articles please use NCBI:txid690256)
current name
Colletotrichum fructicola Prihastuti, L. Cai & K.D. Hyde 2009 Prihastuti, L. Cai & K.D. Hyde, 2009
holotype of Colletotrichum fructicola Prihastuti, L. Cai & K.D. Hyde 2009: MFLU:090228
culture from holotype of Colletotrichum fructicola Prihastuti, L. Cai & K.D. Hyde 2009: ICMP:18581
type material of Colletotrichum fructicola Prihastuti, L. Cai & K.D. Hyde 2009: BPDI:16
includes:
Colletotrichum sp. HHP-2009b
Colletotrichum sp. YLY-2009b
NCBI BLAST name: ascomycete fungi
Rank: species
Genetic code: Translation table 1 (Standard)
Mitochondrial genetic code: Translation table 4 (Mold Mitochondrial; Protozoan Mitochondrial; Coelenterate Mitochondrial; Mycoplasma; Spiroplasma)
Other names:
heterotypic synonym
Colletotrichum ignotum Rojas, Rehner & Samuels 2010
type material of Colletotrichum ignotum: E:886
includes:
Colletotrichum sp. 3-SAB-2009c
Lineage( full )
cellular organisms; Eukaryota; Opisthokonta; Fungi; Dikarya; Ascomycota; saccharomyceta; Pezizomycotina; leotiomyceta; sordariomyceta; Sordariomycetes; Hypocreomycetidae; Glomerellales; Glomerellaceae; Colletotrichum; Colletotrichum gloeosporioides species complex
   Entrez records   
Database name Subtree links Direct links Links from type
Nucleotide 36,401 18,985 17
Protein 144,474 109,698 -
Genome 1 1 -
Popset 1,059 1,059 -
GEO Datasets 14 14 -
PubMed Central 278 278 -
Gene 34,847 1,989 -
SRA Experiments 224 195 -
Identical Protein Groups 41,294 38,435 -
BioProject 36 32 -
BioSample 145 143 -
Assembly 20 18 -
Taxonomy 2 1 -

Comments and References:

Rojas et al. (2010)
Rojas EI, Rehner SA, Samuels GJ, Van Bael SA, Herre EA, Cannon P, Chen R, Pang J, Wang R, Zhang Y, Peng YQ, Sha T, Colletotrichum gloeosporioides s.l. associated with Theobroma cacao and other plants in Panama: multilocus phylogenies distinguish host-associated pathogens from asymptomatic endophytes. 2010. Mycologia 102; 1318-1338.
Weir et al. (2012), doi:10.3114/sim0011
Weir BS, Johnston PR, Damm U. 2012. The Colletotrichum gloeosporioides species complex. Studies in Mycology. 73: 115-180. doi:10.3114/sim0011.
Cao et al. (2019), doi:10.1094/PDIS-02-18-0374-RE
Cao X. et al. 2019. Three Colletotrichum Species, Including a New Species, are Associated to Leaf Anthracnose of Rubber Tree in Hainan, China. Plant Disease 103.
Weir BS et al. (2012), other link:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3458417/
Weir BS, Johnston PR, Damm U. 2012. The Colletotrichum gloeosporioides species complex. Stud Mycol 73(1):115-80.
Yang et al. (2009)
Yang YL, Liu ZY, Cai L, Hyde KD, Yu ZN, McKenzie EHC, 2009. Colletotrichum anthracnose of Amaryllidaceae. Fungal Diversity.

External Information Resources (NCBI LinkOut)

LinkOut Subject LinkOut Provider
GOLD: 2 Organisms organism-specific Genomes On Line Database
Show Biotic Interactions taxonomy/phylogenetic Global Biotic Interactions
2 records from this provider organism-specific WebScipio - eukaryotic gene identification
3 records from provider organism-specific diArk - a resource for eukaryotic genome research
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Information from sequence entries

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Disclaimer: The NCBI taxonomy database is not an authoritative source for nomenclature or classification - please consult the relevant scientific literature for the most reliable information.

Reference: How to cite this resource - Schoch CL, et al. NCBI Taxonomy: a comprehensive update on curation, resources and tools. Database (Oxford). 2020: baaa062. PubMed: 32761142 PMC: PMC7408187.


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